RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 LRRC30A6NM36 301 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 RIIAD1A6NNX1 92 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF878C9JN71 531 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 RGS9O75916 674 aaPredicted RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 PTBP3O95758 552 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 IFNGP01579 166 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 SPARCP09486 303 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 WNT2P09544 360 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 CLUP10909 449 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 RPS2P15880 293 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF3P17036 446 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 FMO3P31513 532 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 GRK5P34947 590 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 PMELP40967 661 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 PAX2Q02962 417 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF92Q03936 586 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 GLYATL3Q5SZD4 288 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 LINC01590Q5TEZ4 76 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 C1orf87Q8N0U7 546 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 OR2AE1Q8NHA4 323 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 TEX47Q8TBZ9 253 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 SPRYD4Q8WW59 207 aaPredicted RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 DVL3Q92997 716 aaPredicted RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 ERGIC1Q969X5 290 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 DACT3Q96B18 629 aaPredicted RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 LRGUKQ96M69 825 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 JMJD8Q96S16 334 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 TMEM246Q9BRR3 403 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 COPS4Q9BT78 406 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 ADAT1Q9BUB4 502 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 CHID1Q9BWS9 393 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 SLC22A4Q9H015 551 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 OPA3Q9H6K4 179 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 TMEM165Q9HC07 324 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 OR5V1Q9UGF6 321 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 NOP16Q9Y3C1 178 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 DHRS12A0PJE2 317 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 AQP12BA6NM10 295 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 CD300LBA8K4G0 201 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF593O00488 134 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 DYNC1I1O14576 645 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 FAM20BO75063 409 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF205O95201 554 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 CST1P01037 141 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 HOXB6P17509 224 aaKnown RBP8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 CA6P23280 308 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 BLVRAP53004 296 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 OR8G1Q15617 311 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 ARMCX4Q5H9R4 360 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 KLF17Q5JT82 389 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 PRAMEF6Q5VXH4 476 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 TMEM179BQ7Z7N9 219 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 KLBQ86Z14 1044 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 AQP12AQ8IXF9 295 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 BPIFB2Q8N4F0 458 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 IQCF1Q8N6M8 205 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 OR6K6Q8NGW6 343 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 GIPC3Q8TF64 312 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 FAM216AQ8WUB2 273 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 SPSB4Q96A44 273 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 FEVQ99581 238 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 KCNJ15Q99712 375 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 MRI1Q9BV20 369 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 SSBP3Q9BWW4 388 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 MARCH7Q9H992 704 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 ESM1Q9NQ30 184 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 MRPL15Q9P015 296 aaKnown RBP8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 MIOXQ9UGB7 285 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 AUP1Q9Y679 476 aa8.75□□□□□ -1.01
HMGXB3-205ENST00000514469 DYSFO75923 2080 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 IGHV2-70DA0A0C4DH43 119 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 H3BN98 237 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 TRIM77I1YAP6 450 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 XRCC2O43543 280 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 GMDSO60547 372 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 PPIAL4GP0DN37 164 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 SLC2A1P11166 492 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 COMPP49747 757 aaPredicted RBP8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 PRKXP51817 358 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 GRB2P62993 217 aaKnown RBP8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 ACTG1P63261 375 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 PAX8Q06710 450 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 MPPED2Q15777 294 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 FAM201AQ5SY85 155 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 ZDHHC22Q8N966 263 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 PLPP7Q8NBV4 271 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 OR8B3Q8NGG8 313 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 OR11L1Q8NGX0 322 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 CANT1Q8WVQ1 401 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 RNF133Q8WVZ7 376 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 NEIL1Q96FI4 390 aaPredicted RBP8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 OR8B2Q96RD0 313 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 INTS14Q96SY0 518 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 THTPAQ9BU02 230 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 TOR3AQ9H497 397 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 MED20Q9H944 212 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 CENPMQ9NSP4 180 aa8.74□□□□□ -1.01
HMGXB3-205ENST00000514469 NUP50Q9UKX7 468 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms