RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	MAD2L1BP	Q15013	274 aa	Predicted RBP	2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	PSG5	Q15238	335 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	UBE2S	Q16763	222 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	ATP6V1F	Q16864	119 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	C5orf64	Q2M2E5	130 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	LINC00483	Q53H64	154 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	CDKL4	Q5MAI5	379 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	VAX1	Q5SQQ9	334 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	KRTAP5-7	Q6L8G8	165 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402		Q6ZN92	141 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	PRSS41	Q7RTY9	318 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	SETD3	Q86TU7	594 aa	Predicted RBP	2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	ZNF546	Q86UE3	836 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	UNC93A	Q86WB7	457 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	RDH10	Q8IZV5	341 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	OR10G9	Q8NGN4	311 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	ACER1	Q8TDN7	264 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	TMEM239	Q8WW34	195 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	OR8D1	Q8WZ84	308 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	EEF1AKMT3	Q96AZ1	226 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	MED8	Q96G25	268 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	ITCH	Q96J02	903 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	ZNF75A	Q96N20	296 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	C7orf50	Q9BRJ6	194 aa	Known RBP	2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	UQCC2	Q9BRT2	126 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	HDHD3	Q9BSH5	251 aa	Predicted RBP	2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	MRM3	Q9HC36	420 aa	Known RBP	2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	SIRT7	Q9NRC8	400 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	CTPS2	Q9NRF8	586 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	CLN6	Q9NWW5	311 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	SLC25A37	Q9NYZ2	338 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	GOLT1B	Q9Y3E0	138 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	CBY1	Q9Y3M2	126 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	HYOU1	Q9Y4L1	999 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	LRP4	O75096	1905 aa		2.2	□□□□□ -2.06
MATR3-223	ENST00000514402	ZNF816-ZNF321P	A0A0X1KG74	233 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	RBMY1B	A6NDE4	496 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	RBMY1E	A6NEQ0	496 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402		F6UB75	175 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402		F8VP50	259 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	PRAMEF26	H0Y7S4	382 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	SMKR1	H3BMG3	65 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	MKRN2OS	H3BPM6	223 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	PRMT5	O14744	637 aa	Predicted RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	AGPAT2	O15120	278 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	COCH	O43405	550 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	MGRN1	O60291	552 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	FKBP6	O75344	327 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	EIF3G	O75821	320 aa	Known RBP eCLIP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	LDOC1	O95751	146 aa	Predicted RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	CAT	P04040	527 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	MRPL3	P09001	348 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	RBMY1D	P0C7P1	496 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	RBMY1A1	P0DJD3	496 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	FOLR1	P15328	257 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	CSNK2A2	P19784	350 aa	Predicted RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	CXCR2	P25025	360 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	UGT2B10	P36537	528 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	RBM34	P42696	430 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	GLP1R	P43220	463 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	PRLHR	P49683	370 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	SP4	Q02446	784 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	SLC25A11	Q02978	314 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	C2orf80	Q0P641	193 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	DUPD1	Q68J44	220 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	TIGD3	Q6B0B8	471 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	C12orf54	Q6X4T0	127 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	ZNF571	Q7Z3V5	609 aa	Predicted RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	ZNF695	Q8IW36	515 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	VKORC1L1	Q8N0U8	176 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	ARRDC1	Q8N5I2	433 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	SNX31	Q8N9S9	440 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	UBALD1	Q8TB05	177 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	ZFP3	Q96NJ6	502 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	COL21A1	Q96P44	957 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	KCTD14	Q9BQ13	255 aa	Predicted RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	ZNF251	Q9BRH9	671 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	TIMM29	Q9BSF4	260 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	DRC3	Q9H069	523 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	NSRP1	Q9H0G5	558 aa	Known RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	WDR55	Q9H6Y2	383 aa	Predicted RBP	2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	UCK1	Q9HA47	277 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	SIAE	Q9HAT2	523 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	RMND1	Q9NWS8	449 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	KCNIP1	Q9NZI2	227 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	ADCY9	O60503	1353 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	MSH6	P52701	1360 aa		2.19	□□□□□ -2.06
MATR3-223	ENST00000514402	COL22A1	Q8NFW1	1626 aa	Predicted RBP	2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	UNC13A	Q9UPW8	1703 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	FABP12	A6NFH5	140 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402		A6NIZ1	184 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	LYRM9	A8MSI8	78 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	HACD1	B0YJ81	288 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	C11orf94	C9JXX5	98 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	hCG_2039718	K7EN88	272 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402		M0QXV9	152 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	SS18L1	O75177	396 aa	Predicted RBP	2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	TRAPPC6A	O75865	159 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	TNFSF13	O75888	250 aa		2.18	□□□□□ -2.06
MATR3-223	ENST00000514402	MYO1D	O94832	1006 aa		2.18	□□□□□ -2.06

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms