RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 EMC7Q9NPA0 242 aa2.55□□□□□ -2
CHD1-211ENST00000514344 VNN3Q9NY84 501 aa2.55□□□□□ -2
CHD1-211ENST00000514344 SELENONQ9NZV5 590 aa2.55□□□□□ -2
CHD1-211ENST00000514344 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.55□□□□□ -2
CHD1-211ENST00000514344 AURKCQ9UQB9 309 aa2.55□□□□□ -2
CHD1-211ENST00000514344 PPP2R2CQ9Y2T4 447 aa2.55□□□□□ -2
CHD1-211ENST00000514344 TMED5Q9Y3A6 229 aa2.55□□□□□ -2
CHD1-211ENST00000514344 JRKLQ9Y4A0 524 aa2.55□□□□□ -2
CHD1-211ENST00000514344 DNAJC15Q9Y5T4 150 aa2.55□□□□□ -2
CHD1-211ENST00000514344 IQCF6A8MYZ5 107 aa2.54□□□□□ -2
CHD1-211ENST00000514344 SGCEO43556 437 aa2.54□□□□□ -2
CHD1-211ENST00000514344 TRMUO75648 421 aaKnown RBP2.54□□□□□ -2
CHD1-211ENST00000514344 RPLP1P05386 114 aaKnown RBP2.54□□□□□ -2
CHD1-211ENST00000514344 GUSBP08236 651 aa2.54□□□□□ -2
CHD1-211ENST00000514344 RBMY1A1P0DJD3 496 aaKnown RBP2.54□□□□□ -2
CHD1-211ENST00000514344 NEFHP12036 1026 aa2.54□□□□□ -2
CHD1-211ENST00000514344 PRPS1L1P21108 318 aa2.54□□□□□ -2
CHD1-211ENST00000514344 CD200P41217 278 aa2.54□□□□□ -2
CHD1-211ENST00000514344 PCBD1P61457 104 aa2.54□□□□□ -2
CHD1-211ENST00000514344 GABPB1Q06547 395 aaPredicted RBP2.54□□□□□ -2
CHD1-211ENST00000514344 DGUOKQ16854 277 aa2.54□□□□□ -2
CHD1-211ENST00000514344 FAM91A1Q658Y4 838 aa2.54□□□□□ -2
CHD1-211ENST00000514344 GPR139Q6DWJ6 353 aa2.54□□□□□ -2
CHD1-211ENST00000514344 FBXW12Q6X9E4 464 aa2.54□□□□□ -2
CHD1-211ENST00000514344 HAPLN4Q86UW8 402 aa2.54□□□□□ -2
CHD1-211ENST00000514344 CELF2-AS1Q8N7Q2 184 aa2.54□□□□□ -2
CHD1-211ENST00000514344 OR9Q1Q8NGQ5 310 aa2.54□□□□□ -2
CHD1-211ENST00000514344 LRRC29Q8WV35 223 aa2.54□□□□□ -2
CHD1-211ENST00000514344 AKR1E2Q96JD6 320 aa2.54□□□□□ -2
CHD1-211ENST00000514344 COG8Q96MW5 612 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ADAT1Q9BUB4 502 aaKnown RBP2.54□□□□□ -2
CHD1-211ENST00000514344 RERGLQ9H628 205 aa2.54□□□□□ -2
CHD1-211ENST00000514344 HEXA-AS1Q9H8Q6 139 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ZNF232Q9UNY5 417 aa2.54□□□□□ -2
CHD1-211ENST00000514344 NDUFAF1Q9Y375 327 aa2.54□□□□□ -2
CHD1-211ENST00000514344 FAM90A8PA6NJQ4 464 aa2.54□□□□□ -2
CHD1-211ENST00000514344 XRCC3O43542 346 aa2.54□□□□□ -2
CHD1-211ENST00000514344 RHBDL1O75783 438 aa2.54□□□□□ -2
CHD1-211ENST00000514344 CHEK2O96017 543 aa2.54□□□□□ -2
CHD1-211ENST00000514344 AMY1AP04745 511 aa2.54□□□□□ -2
CHD1-211ENST00000514344 AMY2AP04746 511 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ARSBP15848 533 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ACADSP16219 412 aa2.54□□□□□ -2
CHD1-211ENST00000514344 CCL3L1P16619 93 aa2.54□□□□□ -2
CHD1-211ENST00000514344 TUBG1P23258 451 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ECHS1P30084 290 aa2.54□□□□□ -2
CHD1-211ENST00000514344 SLC6A1P30531 599 aa2.54□□□□□ -2
CHD1-211ENST00000514344 MAGEA12P43365 314 aa2.54□□□□□ -2
CHD1-211ENST00000514344 INSL3P51460 131 aa2.54□□□□□ -2
CHD1-211ENST00000514344 OR12D2P58182 307 aa2.54□□□□□ -2
CHD1-211ENST00000514344 NCALDP61601 193 aa2.54□□□□□ -2
CHD1-211ENST00000514344 CSNK2BP67870 215 aa2.54□□□□□ -2
CHD1-211ENST00000514344 LRRC74AQ0VAA2 488 aa2.54□□□□□ -2
CHD1-211ENST00000514344 TOP3AQ13472 1001 aaPredicted RBP2.54□□□□□ -2
CHD1-211ENST00000514344 FHL3Q13643 280 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ENDOGQ14249 297 aaKnown RBP2.54□□□□□ -2
CHD1-211ENST00000514344 MAPK11Q15759 364 aa2.54□□□□□ -2
CHD1-211ENST00000514344 PDCD4Q53EL6 469 aaKnown RBP2.54□□□□□ -2
CHD1-211ENST00000514344 C10orf128Q5T292 105 aa2.54□□□□□ -2
CHD1-211ENST00000514344 RNF220Q5VTB9 566 aa2.54□□□□□ -2
CHD1-211ENST00000514344 TEX36Q5VZQ5 186 aa2.54□□□□□ -2
CHD1-211ENST00000514344 PLBD1Q6P4A8 553 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ULK3Q6PHR2 472 aa2.54□□□□□ -2
CHD1-211ENST00000514344 RIMKLAQ8IXN7 391 aa2.54□□□□□ -2
CHD1-211ENST00000514344 NATD1Q8N6N6 113 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ZNRF1Q8ND25 227 aa2.54□□□□□ -2
CHD1-211ENST00000514344 OR11H1Q8NG94 326 aa2.54□□□□□ -2
CHD1-211ENST00000514344 OR5L1Q8NGL2 311 aa2.54□□□□□ -2
CHD1-211ENST00000514344 DNAJA4Q8WW22 397 aaPredicted RBP2.54□□□□□ -2
CHD1-211ENST00000514344 SPRYD4Q8WW59 207 aaPredicted RBP2.54□□□□□ -2
CHD1-211ENST00000514344 STMN2Q93045 179 aa2.54□□□□□ -2
CHD1-211ENST00000514344 RASD2Q96D21 266 aa2.54□□□□□ -2
CHD1-211ENST00000514344 PAFAH2Q99487 392 aa2.54□□□□□ -2
CHD1-211ENST00000514344 SLC25A33Q9BSK2 321 aa2.54□□□□□ -2
CHD1-211ENST00000514344 TMED9Q9BVK6 235 aa2.54□□□□□ -2
CHD1-211ENST00000514344 WDR13Q9H1Z4 485 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ARMC7Q9H6L4 198 aa2.54□□□□□ -2
CHD1-211ENST00000514344 CACYBPQ9HB71 228 aaKnown RBP2.54□□□□□ -2
CHD1-211ENST00000514344 TUBG2Q9NRH3 451 aa2.54□□□□□ -2
CHD1-211ENST00000514344 ZFP57Q9NU63 452 aa2.54□□□□□ -2
CHD1-211ENST00000514344 N6AMT1Q9Y5N5 214 aa2.54□□□□□ -2
CHD1-211ENST00000514344 PKD1P98161 4303 aa2.54□□□□□ -2
CHD1-211ENST00000514344 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 A0A1W2PRG6 482 aa2.53□□□□□ -2
CHD1-211ENST00000514344 NUPR2A6NF83 97 aa2.53□□□□□ -2
CHD1-211ENST00000514344 GOLGA6L6A8MZA4 724 aa2.53□□□□□ -2
CHD1-211ENST00000514344 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 IMPA2O14732 288 aa2.53□□□□□ -2
CHD1-211ENST00000514344 AZIN1O14977 448 aa2.53□□□□□ -2
CHD1-211ENST00000514344 EIF3HO15372 352 aaKnown RBP eCLIP2.53□□□□□ -2
CHD1-211ENST00000514344 FMO6PO60774 539 aa2.53□□□□□ -2
CHD1-211ENST00000514344 LYPLA1O75608 230 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 SCG5P05408 212 aa2.53□□□□□ -2
CHD1-211ENST00000514344 CST2P09228 141 aa2.53□□□□□ -2
CHD1-211ENST00000514344 BMP2P12643 396 aa2.53□□□□□ -2
CHD1-211ENST00000514344 MUC1P15941 1255 aaPredicted RBP2.53□□□□□ -2
CHD1-211ENST00000514344 CRISP3P54108 245 aa2.53□□□□□ -2
CHD1-211ENST00000514344 GNG11P61952 73 aa2.53□□□□□ -2
CHD1-211ENST00000514344 MPP2Q14168 576 aa2.53□□□□□ -2
CHD1-211ENST00000514344 GK2Q14410 553 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms