RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 DRAM2Q6UX65 266 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 COLCA1Q6ZS62 124 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 AHSA2Q719I0 299 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 PRSS45Q7RTY3 260 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 LHFPL3Q86UP9 236 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF679Q8IYX0 411 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 YIPF7Q8N8F6 280 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 OR8B12Q8NGG6 310 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 SNX33Q8WV41 574 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 GGHQ92820 318 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 NINJ1Q92982 152 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 APOBEC3DQ96AK3 386 aaPredicted RBP8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 CMBLQ96DG6 245 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 PGAM5Q96HS1 289 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 SOX7Q9BT81 388 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ALG8Q9BVK2 526 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 MROQ9BYG7 248 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 FAM206AQ9NX38 181 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 TAAR3PQ9P1P4 343 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 GNG8Q9UK08 70 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 RPL36Q9Y3U8 105 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 HSPE1-MOB4S4R3N1 261 aa8.39□□□□□ -1.07
TOPBP1-209ENST00000513818 ARFGEF3Q5TH69 2177 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 TMEM269A0A1B0GVZ9 245 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ZSCAN5BA6NJL1 495 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 B9A039 149 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 LOC110117498-PIK3R3F6TDL0 507 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 M0R233 179 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 SLC1A7O00341 560 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 PHYHO14832 338 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 TIMM8AO60220 97 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 SRSF10O75494 262 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 IGHA1P01876 353 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 KRT8P05787 483 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF250P15622 560 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 RBMXP38159 391 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 RGS6P49758 472 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ETV1P50549 477 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 OR12D2P58182 307 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF92Q03936 586 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 RAB40BQ12829 278 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 GK2Q14410 553 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 TIGD6Q17RP2 521 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ODF4Q2M2E3 257 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 DEFB113Q30KQ7 82 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF718Q3SXZ3 478 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 LIPNQ5VXI9 398 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 MRPL21Q7Z2W9 205 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ACBD7Q8N6N7 88 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 DVL3Q92997 716 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 C4orf36Q96KX1 117 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 SORCS2Q96PQ0 1159 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 MNTQ99583 582 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 VRK1Q99986 396 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF649Q9BS31 505 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 ISG20L2Q9H9L3 353 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 MSL2Q9HCI7 577 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 PAK1IP1Q9NWT1 392 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 CLEC2DQ9UHP7 191 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 PURGQ9UJV8 347 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 RAB26Q9ULW5 256 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 SLC22A13Q9Y226 551 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 VPS13CQ709C8 3753 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 USF3Q68DE3 2245 aa8.38□□□□□ -1.07
TOPBP1-209ENST00000513818 TEX15Q9BXT5 2789 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 NOTCH2Q04721 2471 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 IGLV3-9A0A075B6K5 115 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 METTL15A6NJ78 407 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 J3QLW9 94 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 SPRY3O43610 288 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 FADS2O95864 444 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 LIMS3P0CW19 117 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 LIMS4P0CW20 117 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF19P17023 458 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 MAGEB1P43366 347 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 PTH2RP49190 550 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 EGR3Q06889 387 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 MALLQ13021 153 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 DOC2BQ14184 412 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF829Q3KNS6 432 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 CDONQ4KMG0 1287 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 C6orf141Q5SZD1 244 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF684Q5T5D7 378 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 OR2G6Q5TZ20 316 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 MBNL2Q5VZF2 373 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 PGAP1Q75T13 922 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 FAM220AQ7Z4H9 259 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 COMMD2Q86X83 199 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF786Q8N393 782 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF540Q8NDQ6 660 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 OR56B2PQ8NGI1 322 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 OR5L1Q8NGL2 311 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 RORBQ92753 470 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 SGK3Q96BR1 496 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 REEP6Q96HR9 211 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 FAM71F1Q96KD3 344 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 LYZL4Q96KX0 146 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms