RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 MALT1Q9UDY8 824 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 RBMX2Q9Y388 322 aaKnown RBP7.34□□□□□ -1.23
RNF4-220ENST00000513578 LIPGQ9Y5X9 500 aa7.34□□□□□ -1.23
RNF4-220ENST00000513578 M0R135 149 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 EFSO43281 561 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 LYRM1O43325 122 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 XRCC3O43542 346 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 ZNF32P17041 273 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 RAB3AP20336 220 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 THBS4P35443 961 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 EIF2S3P41091 472 aaKnown RBP7.33□□□□□ -1.24
RNF4-220ENST00000513578 PTH2RP49190 550 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 INPP1P49441 399 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SRYQ05066 204 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 DYRK1AQ13627 763 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 C2orf76Q3KRA6 126 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SLC36A2Q495M3 483 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 FAM57BQ71RH2 274 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 UTS2BQ765I0 119 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SLC16A14Q7RTX9 510 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 ABHD12BQ7Z5M8 362 aaPredicted RBP7.33□□□□□ -1.24
RNF4-220ENST00000513578 LUZP2Q86TE4 346 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SKA3Q8IX90 412 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 TUSC5Q8IXB3 177 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 CADM3Q8N126 398 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 LRRC18Q8N456 261 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 ZADH2Q8N4Q0 377 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SNIP1Q8TAD8 396 aaKnown RBP7.33□□□□□ -1.24
RNF4-220ENST00000513578 FNDC9Q8TBE3 224 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 OR51E1Q8TCB6 317 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SSC4DQ8WTU2 575 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 HTRA1Q92743 480 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 APH1AQ96BI3 265 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
RNF4-220ENST00000513578 ADAT3Q96EY9 351 aaPredicted RBP7.33□□□□□ -1.24
RNF4-220ENST00000513578 ZNF799Q96GE5 643 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 PGAM5Q96HS1 289 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 NEURL2Q9BR09 285 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 NUDT16L1Q9BRJ7 211 aaKnown RBP7.33□□□□□ -1.24
RNF4-220ENST00000513578 OR2H1Q9GZK4 316 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 DEFB127Q9H1M4 99 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 OR10A2Q9H208 303 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 RGCCQ9H4X1 137 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 METTL17Q9H7H0 456 aaPredicted RBP7.33□□□□□ -1.24
RNF4-220ENST00000513578 GPR84Q9NQS5 396 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SLC7A10Q9NS82 523 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 PLEK2Q9NYT0 353 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 ZNF319Q9P2F9 582 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 SLC5A6Q9Y289 635 aa7.33□□□□□ -1.24
RNF4-220ENST00000513578 TMEM272A0A1B0GTI8 110 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 CIB4A0PJX0 185 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 SLC22A20A6NK97 555 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 CYSRT1A8MQ03 144 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 ZNF587BE7ETH6 402 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 SULT1C2O00338 296 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 TFECO14948 347 aaPredicted RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 DOK2O60496 412 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 SS18L1O75177 396 aaPredicted RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 MTRF1O75570 445 aaKnown RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 CTAG2O75638 210 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 DHRS3O75911 302 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 SCGNO76038 276 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 CNOT4O95628 575 aaKnown RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 BPNT1O95861 308 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 ECDO95905 644 aaPredicted RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 ADRB1P08588 477 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 TRAPPC2P0DI81 140 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 TRAPPC2BP0DI82 140 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 PRF1P14222 555 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 ZNF20P17024 532 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 ZNF24P17028 368 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 GNALP38405 381 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 ALDH3B1P43353 468 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 KIR2DL3P43628 341 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 OR3A2P47893 321 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 POU3F4P49335 361 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 GSK3AP49840 483 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 CLDN12P56749 244 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 BTG1P62324 171 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 PSG4Q00888 419 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 SSBP1Q04837 148 aaKnown RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 ZNF169Q14929 603 aaPredicted RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 TAB1Q15750 504 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 FAM189A2Q15884 450 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 TMEM69Q5SWH9 247 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 GLYATL3Q5SZD4 288 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 Q6ZS92 163 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 KRT74Q7RTS7 529 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 OR2W3Q7Z3T1 314 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 SIAH3Q8IW03 269 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 MCEMP1Q8IX19 187 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 ZNF100Q8IYN0 542 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 OR5AS1Q8N127 324 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 OR51D1Q8NGF3 324 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 OR51A2Q8NGJ7 313 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 PP6455Q8WZ26 134 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 SARAFQ96BY9 339 aa7.32□□□□□ -1.24
RNF4-220ENST00000513578 GMPPAQ96IJ6 420 aaPredicted RBP7.32□□□□□ -1.24
RNF4-220ENST00000513578 BOD1Q96IK1 185 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms