RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 VPREB3Q9UKI3 123 aa3.9□□□□□ -1.79
HTT-211ENST00000513326 U3KQK5 164 aa3.9□□□□□ -1.79
HTT-211ENST00000513326 A0A087WUJ7 227 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 A0A1W2PRD5 423 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 A0A1W2PRF3 423 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 A0A1W2PRM7 423 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 PLSCR5A0PG75 271 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 DUXAA6NLW8 204 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 USP17L23D6RBM5 183 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 C3orf84H3BNL1 204 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 AIM2O14862 343 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 AZIN1O14977 448 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 CHST1O43916 411 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 CPSF4O95639 269 aaKnown RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 GUSBP08236 651 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 G6PDP11413 515 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 TCP1P17987 556 aaKnown RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 NCF2P19878 526 aaPredicted RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 CSNK1A1P48729 337 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 BIDP55957 195 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 PPP1CBP62140 327 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 ELF3P78545 371 aaPredicted RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 PSG7Q13046 419 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 KLRD1Q13241 179 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 MELKQ14680 651 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 TBC1D28Q2M2D7 210 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 XKR7Q5GH72 579 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 PABPC1L2AQ5JQF8 200 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 ATAD3BQ5T9A4 648 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 IL23RQ5VWK5 629 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 WDR25Q64LD2 544 aaPredicted RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 WBP2NLQ6ICG8 309 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 SLC27A4Q6P1M0 643 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 ADAMTSL5Q6ZMM2 481 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 GDPGP1Q6ZNW5 385 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 SLC22A9Q8IVM8 553 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 LRRC18Q8N456 261 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 OR2Z1Q8NG97 314 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 OR10AD1Q8NGE0 317 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 OR6N1Q8NGY5 312 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 AGR3Q8TD06 166 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 TWIST2Q8WVJ9 160 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 TMEM54Q969K7 222 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 OTULINQ96BN8 352 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 MOAP1Q96BY2 351 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 RBMXL1Q96E39 390 aaKnown RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 METTL2AQ96IZ6 378 aaKnown RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 POM121L2Q96KW2 1035 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 OR2V2Q96R30 315 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 FUT8Q9BYC5 575 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 NUF2Q9BZD4 464 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 BCL2L14Q9BZR8 327 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 EGLN1Q9GZT9 426 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 RNF121Q9H920 327 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 NANOGQ9H9S0 305 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 POLE3Q9NRF9 147 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 HAO1Q9UJM8 370 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 ZNF443Q9Y2A4 671 aaPredicted RBP3.89□□□□□ -1.79
HTT-211ENST00000513326 FAM96BQ9Y3D0 163 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 LYVE1Q9Y5Y7 322 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 CSMD3Q7Z407 3707 aa3.89□□□□□ -1.79
HTT-211ENST00000513326 IGKV1D-43A0A0B4J1Z2 117 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 LOC102725191A0A1B0GVB3 256 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 A0A1B0GW55 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 A0A1W2PPM1 405 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 C5orf49A4QMS7 147 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 PRSS47A8MTI9 375 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 ZNF879B4DU55 563 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 C11orf98E9PRG8 122 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 P2RY10O00398 339 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 XPNPEP2O43895 674 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 TIMM8AO60220 97 aaPredicted RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 DOK2O60496 412 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 PTP4A3O75365 173 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 BGLAPP02818 100 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 SNRPAP09012 282 aaKnown RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 HOXB5P09067 269 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4L2P0CJ85 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4L3P0CJ86 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4L4P0CJ87 422 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4L5P0CJ88 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4L6P0CJ89 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 DUX4L7P0CJ90 424 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 MYL2P10916 166 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 NEFHP12036 1026 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 IL7RP16871 459 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 ZNF32P17041 273 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 UQCRC2P22695 453 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 STOMP27105 288 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 GTF2E2P29084 291 aaKnown RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 CDAP32320 146 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 CDKN2CP42773 168 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 SERPINB9P50453 376 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 RASSF2P50749 326 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 CDH12P55289 794 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 HPCAP84074 193 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 RBMS2Q15434 407 aaKnown RBP3.88□□□□□ -1.79
HTT-211ENST00000513326 LY6EQ16553 131 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 ZNF718Q3SXZ3 478 aa3.88□□□□□ -1.79
HTT-211ENST00000513326 ZNF404Q494X3 552 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms