RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 COX20Q5RI15 118 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 MRPL2Q5T653 305 aaKnown RBP7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 OLIG3Q7RTU3 272 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 C6orf201Q7Z4U5 140 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 TGIF2LXQ8IUE1 241 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 LKAAEAR1Q8TD35 194 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 ZNF337Q9Y3M9 751 aa7.96□□□□□ -1.13
LIMCH1-218ENST00000513024 CDRT15L2A8MXV6 281 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 C17orf105B2RV13 164 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR2J3O76001 311 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 EDN1P05305 212 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 ATXN1LP0C7T5 689 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 PTGFRP43088 359 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 GSK3AP49840 483 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 UBE2MP61081 183 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 TMEM241Q24JQ0 296 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 DHRS7BQ6IAN0 325 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 REC114Q7Z4M0 266 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 ANGPTL5Q86XS5 388 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 TRIB1Q96RU8 372 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 TBX15Q96SF7 602 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 GPX7Q96SL4 187 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR10A2Q9H208 303 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 UQCC1Q9NVA1 299 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 HSPB8Q9UJY1 196 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 RAB22AQ9UL26 194 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 LINC00862A6NCI5 91 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR4C45A6NMZ5 311 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 DEGS1O15121 323 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 DDAH2O95865 285 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 NUDT3O95989 172 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR4E1P0C645 316 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 DAOP14920 347 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OPRD1P41143 372 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 COMPP49747 757 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 SERTAD2Q14140 314 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 KDM4DQ6B0I6 523 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 C12orf54Q6X4T0 127 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 PELI3Q8N2H9 469 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR2J1Q9GZK6 312 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR51B6Q9H340 312 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 HRASLSQ9HDD0 168 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 HAND1O96004 215 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 CHRM2P08172 466 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 FBP1P09467 338 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR8U8P0C7N1 319 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 SLC25A6P12236 298 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 PXNP49023 591 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 DAP3P51398 398 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 TAS2R60P59551 318 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 TMEM267Q0VDI3 215 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 YOD1Q5VVQ6 348 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 MRPL21Q7Z2W9 205 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 ADGRE4PQ86SQ3 457 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 SYT9Q86SS6 491 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR5K2Q8NHB8 316 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 ELSPBP1Q96BH3 223 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 RHOVQ96L33 236 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 C2orf50Q96LR7 162 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 OR4C12Q96R67 309 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 NMNAT3Q96T66 252 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 CDX2Q99626 313 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 SLC46A2Q9BY10 475 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 SEC11CQ9BY50 192 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 HES7Q9BYE0 225 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 IL21Q9HBE4 155 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 Q9N2K0 584 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 LANCL2Q9NS86 450 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 TRAPPC4Q9Y296 219 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 BRWD3Q6RI45 1802 aa7.96□□□□□ -1.14
LIMCH1-218ENST00000513024 DUXBA0A1W2PPF3 345 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 SLC17A3O00476 420 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ARG1P05089 322 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 SLC25A4P12235 298 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ITGB7P26010 798 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 CD27P26842 260 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 SEMA3BQ13214 749 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 GABRA6Q16445 453 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 CATSPERDQ86XM0 798 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 MS4A4AQ96JQ5 239 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ULBP3Q9BZM4 244 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 CSNK1G1Q9HCP0 422 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 CTSFQ9UBX1 484 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 MUTYHQ9UIF7 546 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 SSUH2Q9Y2M2 353 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 IGKV6D-21A0A0A0MT36 114 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 HMX2A2RU54 273 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 SEMA7AO75326 666 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ZNF253O75346 499 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 TBXA2RP21731 343 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ENPP1P22413 925 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ELAVL4P26378 380 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 SNRPNP63162 240 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 SLC35A1P78382 337 aa7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 POU3F1Q03052 451 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-218ENST00000513024 ZNF718Q3SXZ3 478 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms