RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 DOCK11Q5JSL3 2073 aa15.04■□□□□ -0
TPM3-220ENST00000509601 CD300LBA8K4G0 201 aa15.03■□□□□ -0
TPM3-220ENST00000509601 A8MXK9 166 aa15.03■□□□□ -0
TPM3-220ENST00000509601 RGS9O75916 674 aaPredicted RBP15.03■□□□□ -0
TPM3-220ENST00000509601 FSTL3O95633 263 aa15.03■□□□□ -0
TPM3-220ENST00000509601 SPARCP09486 303 aa15.03■□□□□ -0
TPM3-220ENST00000509601 ZNF12P17014 697 aa15.03■□□□□ -0
TPM3-220ENST00000509601 PRKXP51817 358 aa15.03■□□□□ -0
TPM3-220ENST00000509601 RAD23AP54725 363 aa15.03■□□□□ -0
TPM3-220ENST00000509601 DRAM2Q6UX65 266 aa15.03■□□□□ -0
TPM3-220ENST00000509601 TRPM8Q7Z2W7 1104 aa15.03■□□□□ -0
TPM3-220ENST00000509601 MUC20Q8N307 709 aaPredicted RBP15.03■□□□□ -0
TPM3-220ENST00000509601 IQCF1Q8N6M8 205 aa15.03■□□□□ -0
TPM3-220ENST00000509601 CELF2-AS1Q8N7Q2 184 aa15.03■□□□□ -0
TPM3-220ENST00000509601 OR2AE1Q8NHA4 323 aa15.03■□□□□ -0
TPM3-220ENST00000509601 ZNF418Q8TF45 676 aaPredicted RBP15.03■□□□□ -0
TPM3-220ENST00000509601 SPRYD4Q8WW59 207 aaPredicted RBP15.03■□□□□ -0
TPM3-220ENST00000509601 SLAMF6Q96DU3 332 aa15.03■□□□□ -0
TPM3-220ENST00000509601 KCNJ15Q99712 375 aa15.03■□□□□ -0
TPM3-220ENST00000509601 MED20Q9H944 212 aa15.03■□□□□ -0
TPM3-220ENST00000509601 ARRDC5A6NEK1 342 aa15.02■□□□□ -0
TPM3-220ENST00000509601 IFNGP01579 166 aa15.02■□□□□ -0
TPM3-220ENST00000509601 CD200P41217 278 aa15.02■□□□□ -0
TPM3-220ENST00000509601 HILS1P60008 231 aa15.02■□□□□ -0
TPM3-220ENST00000509601 PAX2Q02962 417 aa15.02■□□□□ -0
TPM3-220ENST00000509601 ZNF154Q13106 437 aa15.02■□□□□ -0
TPM3-220ENST00000509601 SCGB2A2Q13296 93 aa15.02■□□□□ -0
TPM3-220ENST00000509601 TUSC1Q2TAM9 212 aa15.02■□□□□ -0
TPM3-220ENST00000509601 GLYATL3Q5SZD4 288 aa15.02■□□□□ -0
TPM3-220ENST00000509601 Q8TCH9 128 aa15.02■□□□□ -0
TPM3-220ENST00000509601 ZFAND2BQ8WV99 257 aa15.02■□□□□ -0
TPM3-220ENST00000509601 DVL3Q92997 716 aaPredicted RBP15.02■□□□□ -0
TPM3-220ENST00000509601 SLC7A6OSQ96CW6 309 aaPredicted RBP15.02■□□□□ -0
TPM3-220ENST00000509601 TMEM246Q9BRR3 403 aa15.02■□□□□ -0
TPM3-220ENST00000509601 CENPMQ9NSP4 180 aa15.02■□□□□ -0
TPM3-220ENST00000509601 INSIG2Q9Y5U4 225 aa15.02■□□□□ -0
TPM3-220ENST00000509601 DHRS12A0PJE2 317 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 FAM183AA6NL82 134 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 SLC2A1P11166 492 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 CA6P23280 308 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 CPT2P23786 658 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 GRK5P34947 590 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 BLVRAP53004 296 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 PAX8Q06710 450 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 MPPED2Q15777 294 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 PRAMEF6Q5VXH4 476 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 MRPL21Q7Z2W9 205 aaKnown RBP15.01□□□□□ -0.01
TPM3-220ENST00000509601 HS3ST5Q8IZT8 346 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 ERGIC1Q969X5 290 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 COPS4Q9BT78 406 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 MARCH7Q9H992 704 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 PDP1Q9P0J1 537 aaPredicted RBP15.01□□□□□ -0.01
TPM3-220ENST00000509601 PPIAL4AQ9Y536 164 aa15.01□□□□□ -0.01
TPM3-220ENST00000509601 RIIAD1A6NNX1 92 aa15□□□□□ -0.01
TPM3-220ENST00000509601 PTBP3O95758 552 aaKnown RBP15□□□□□ -0.01
TPM3-220ENST00000509601 ZNF3P17036 446 aa15□□□□□ -0.01
TPM3-220ENST00000509601 PRKACGP22612 351 aa15□□□□□ -0.01
TPM3-220ENST00000509601 CD80P33681 288 aa15□□□□□ -0.01
TPM3-220ENST00000509601 HOXA4Q00056 320 aaPredicted RBP15□□□□□ -0.01
TPM3-220ENST00000509601 GINS1Q14691 196 aa15□□□□□ -0.01
TPM3-220ENST00000509601 TAF13Q15543 124 aa15□□□□□ -0.01
TPM3-220ENST00000509601 ZNF404Q494X3 552 aa15□□□□□ -0.01
TPM3-220ENST00000509601 KLF17Q5JT82 389 aaPredicted RBP15□□□□□ -0.01
TPM3-220ENST00000509601 SPATC1Q76KD6 591 aa15□□□□□ -0.01
TPM3-220ENST00000509601 PRSS45Q7RTY3 260 aa15□□□□□ -0.01
TPM3-220ENST00000509601 DPY19L4Q7Z388 723 aa15□□□□□ -0.01
TPM3-220ENST00000509601 KLBQ86Z14 1044 aa15□□□□□ -0.01
TPM3-220ENST00000509601 OR6K6Q8NGW6 343 aa15□□□□□ -0.01
TPM3-220ENST00000509601 TEX47Q8TBZ9 253 aa15□□□□□ -0.01
TPM3-220ENST00000509601 SPSB4Q96A44 273 aa15□□□□□ -0.01
TPM3-220ENST00000509601 DACT3Q96B18 629 aaPredicted RBP15□□□□□ -0.01
TPM3-220ENST00000509601 SGK3Q96BR1 496 aa15□□□□□ -0.01
TPM3-220ENST00000509601 AMELYQ99218 206 aa15□□□□□ -0.01
TPM3-220ENST00000509601 SLC6A7Q99884 636 aa15□□□□□ -0.01
TPM3-220ENST00000509601 SLC22A4Q9H015 551 aa15□□□□□ -0.01
TPM3-220ENST00000509601 MIOXQ9UGB7 285 aa15□□□□□ -0.01
TPM3-220ENST00000509601 LRCH1Q9Y2L9 728 aa15□□□□□ -0.01
TPM3-220ENST00000509601 N6AMT1Q9Y5N5 214 aa15□□□□□ -0.01
TPM3-220ENST00000509601 AUP1Q9Y679 476 aa15□□□□□ -0.01
TPM3-220ENST00000509601 TENM1Q9UKZ4 2725 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 GGT3PA6NGU5 568 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 LRRC30A6NM36 301 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 H3BN98 237 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 GNGT2O14610 69 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 GMDSO60547 372 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 FAM20BO75063 409 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 GLCEO94923 617 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 GSTT1P30711 240 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 CDK5Q00535 292 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 EIF2B1Q14232 305 aaKnown RBP14.99□□□□□ -0.01
TPM3-220ENST00000509601 OR8G1Q15617 311 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 ESCO2Q56NI9 601 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 LYPD2Q6UXB3 125 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 TIGD4Q8IY51 512 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 C1orf87Q8N0U7 546 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 PAPD5Q8NDF8 572 aaKnown RBP14.99□□□□□ -0.01
TPM3-220ENST00000509601 C19orf18Q8NEA5 215 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 BCAS4Q8TDM0 211 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 RNF133Q8WVZ7 376 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 C22orf15Q8WYQ4 148 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms