RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TCF20Q9UGU0 1960 aaKnown RBP3.96□□□□□ -1.78
NIPBL-206ENST00000509429 MYH2Q9UKX2 1941 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MYH11P35749 1972 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 LAMB1P07942 1786 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 DLEC1Q9Y238 1755 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 BCL9LQ86UU0 1499 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 CNTNAP1P78357 1384 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 TBC1D3IA0A087WXS9 549 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 TRBV9A0A0B4J1U6 114 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 A0A1W2PS29 197 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 TMEM150BA6NC51 233 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ARL5CA6NH57 179 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SLC22A20A6NK97 555 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 C1orf196B1AJZ1 125 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 J3QLI3 93 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 K7EN84 100 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ACOT8O14734 319 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 TNFRSF13BO14836 293 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-206ENST00000509429 CASKO14936 926 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SLC16A5O15375 505 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ERI3O43414 337 aaKnown RBP3.95□□□□□ -1.78
NIPBL-206ENST00000509429 PRAF2O60831 178 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 WDR1O75083 606 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 NDUFA7O95182 113 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 FGF19O95750 216 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 HAND1O96004 215 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 IFNA7P01567 189 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 IGHV2-5P01817 119 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 RHOCP08134 193 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 CT62P0C5K7 136 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 DANCRP0C864 163 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 IRF1P10914 325 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 GCSHP23434 173 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 PIGAP37287 484 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 GYG1P46976 350 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 GZMKP49863 264 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 RAB5CP51148 216 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 NDUFA8P51970 172 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 FUT6P51993 359 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 CLDN12P56749 244 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 RHOAP61586 193 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 CDKL1Q00532 357 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 PSG6Q00889 435 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 KLRC3Q07444 240 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 EXOSC2Q13868 293 aaKnown RBP3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF234Q14588 700 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MAD2L1BPQ15013 274 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-206ENST00000509429 RSU1Q15404 277 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 OR1Q1Q15612 314 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 PRSS8Q16651 343 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 CDKN3Q16667 212 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 DUOXA1Q1HG43 343 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MS4A18Q3C1V0 323 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SCGB2B2Q4G0G5 96 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 KIAA0895LQ68EN5 471 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 RGMBQ6NW40 437 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF613Q6PF04 617 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF620Q6ZNG0 422 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 TMPPEQ6ZT21 453 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 LANCL3Q6ZV70 420 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SHFQ7M4L6 423 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 OR2W3Q7Z3T1 314 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MDGA2Q7Z553 956 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 DEFB128Q7Z7B8 93 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 NAA40Q86UY6 237 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 GALNT16Q8N428 558 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SPEM1Q8N4L4 309 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 NPEPL1Q8NDH3 523 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 OR51S1Q8NGJ8 323 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 OR5R1Q8NH85 324 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 LYPD6BQ8NI32 183 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 C2CD4CQ8TF44 421 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 DNASE2BQ8WZ79 361 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 KCNJ9Q92806 393 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 UCN3Q969E3 161 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MYLPFQ96A32 169 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MSI2Q96DH6 328 aaKnown RBP3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SMIM19Q96E16 107 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MRAP2Q96G30 205 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SMARCD1Q96GM5 515 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 REEP6Q96HR9 211 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 OR7D2Q96RA2 312 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 OR52E6Q96RD3 313 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 TBX5Q99593 518 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ATF6BQ99941 703 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 C1QTNF5Q9BXJ0 243 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 REG4Q9BYZ8 158 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 SEMA6AQ9H2E6 1030 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 PLSCR3Q9NRY6 295 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 B3GAT1Q9P2W7 334 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 LGALS13Q9UHV8 139 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF230Q9UIE0 474 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-206ENST00000509429 FBXO4Q9UKT5 387 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 USP22Q9UPT9 525 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 POLDIP2Q9Y2S7 368 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 AP4S1Q9Y587 144 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 TIMM10BQ9Y5J6 103 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MYH13Q9UKX3 1938 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 MEGF6O75095 1541 aa3.95□□□□□ -1.78
NIPBL-206ENST00000509429 KCPQ6ZWJ8 1503 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms