RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 SEMA6AQ9H2E6 1030 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 GCM1Q9NP62 436 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 TMEM106BQ9NUM4 274 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 TMEFF2Q9UIK5 374 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 NPTNQ9Y639 398 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 MXRA5Q9NR99 2828 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 ZNF878C9JN71 531 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 EBAG9O00559 213 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 SELENOFO60613 162 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 HLA-DPB1P04440 258 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 SBK2P0C263 348 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 FAM157CP0CG43 387 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 SLC2A1P11166 492 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 ALOX5APP20292 161 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 POLR2IP36954 125 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 PMELP40967 661 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 GRB2P62993 217 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 CR1LQ2VPA4 569 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 SLX4IPQ5VYV7 408 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 CXXC5Q7LFL8 322 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 LRRC28Q86X40 367 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 BHLHE23Q8NDY6 225 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 OR2AE1Q8NHA4 323 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 THEM6Q8WUY1 208 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 SPSB4Q96A44 273 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 MEGF10Q96KG7 1140 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 SIGLEC11Q96RL6 698 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 SHARPINQ9H0F6 387 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 TOR3AQ9H497 397 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 KRT84Q9NSB2 600 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 KIF17Q9P2E2 1029 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 ZNF319Q9P2F9 582 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 LPAR3Q9UBY5 353 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 PPP1R3CQ9UQK1 317 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 N6AMT1Q9Y5N5 214 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 WNK2Q9Y3S1 2297 aa13.61□□□□□ -0.23
PDLIM5-212ENST00000509333 ARHGAP32A7KAX9 2087 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 ZAR1LA6NP61 321 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 F5H5P2 479 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 TMEM178BH3BS89 294 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 PRKYO43930 277 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 SRP9P49458 86 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 MAB21L1Q13394 359 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 APOFQ13790 326 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 MRPL21Q7Z2W9 205 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 PEG10Q86TG7 708 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 OR10AD1Q8NGE0 317 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 SPRYD4Q8WW59 207 aaPredicted RBP13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 PYDC1Q8WXC3 89 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 OSBPL10Q9BXB5 764 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 ZNF665Q9H7R5 613 aa13.6□□□□□ -0.23
PDLIM5-212ENST00000509333 CCDC182A6NF36 153 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 H3BNX3 289 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 PLPP2O43688 288 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 IGHV2-5P01817 119 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 APOC1P02654 83 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 ANPEPP15144 967 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 CX3CR1P49238 355 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 KPNB1Q14974 876 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 AADACL4Q5VUY2 407 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 C12orf73Q69YU5 71 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 MEPCEQ7L2J0 689 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 SLC16A9Q7RTY1 509 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 BCDIN3DQ7Z5W3 292 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 TCEANCQ8N8B7 351 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 TMEM186Q96B77 213 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 PKP2Q99959 881 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 YIPF3Q9GZM5 350 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 TMEM165Q9HC07 324 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 OAZ3Q9UMX2 235 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 KLHDC2Q9Y2U9 406 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 COL6A5A8TX70 2615 aa13.59□□□□□ -0.23
PDLIM5-212ENST00000509333 GGT3PA6NGU5 568 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 IFNL4K9M1U5 179 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 LYNP07948 512 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 MSMBP08118 114 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 H2BFMP0C1H6 154 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 CA6P23280 308 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 NAA10P41227 235 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 GATA4P43694 442 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 ZNF121P58317 390 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 RPS7P62081 194 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 FAM3AP98173 230 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 ZNF181Q2M3W8 571 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 CELF2-AS1Q8N7Q2 184 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 ZNF420Q8TAQ5 688 aaPredicted RBP13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 CIB1Q99828 191 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 SLC22A4Q9H015 551 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 SP140LQ9H930 580 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 LPAR2Q9HBW0 351 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 HIF1ANQ9NWT6 349 aa13.58□□□□□ -0.24
PDLIM5-212ENST00000509333 FBN1P35555 2871 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 IGHV3-64DA0A0J9YX35 117 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 XRCC2O43543 280 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 GMDSO60547 372 aa13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 PTBP3O95758 552 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 ANXA2P07355 339 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-212ENST00000509333 HSD11B1P28845 292 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms