RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SLC2A1P11166 492 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 ATP6V1B1P15313 513 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 DDOSTP39656 456 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 ETV1P50549 477 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 OR12D2P58182 307 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 TAS2R43P59537 309 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 ADIPOQQ15848 244 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 CCDC58Q4VC31 144 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 NAA40Q86UY6 237 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 FTMTQ8N4E7 242 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 RFLNBQ8N5W9 214 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 HAVCR1Q96D42 359 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 SIGLEC11Q96RL6 698 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 CDCA4Q9BXL8 241 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 PBOV1Q9GZY1 135 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 MS4A5Q9H3V2 200 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 CXorf56Q9H5V9 222 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 FAM206AQ9NX38 181 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 UBAP1Q9NZ09 502 aa17.26■□□□□ 0.35
USP53-203ENST00000507597 NOP16Q9Y3C1 178 aaKnown RBP17.26■□□□□ 0.35
USP53-203ENST00000507597 GGT3PA6NGU5 568 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 TIMM8AO60220 97 aaPredicted RBP17.25■□□□□ 0.35
USP53-203ENST00000507597 IGHV3-13P01766 116 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 ZNF12P17014 697 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 CCR9P51686 369 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 SPATA46Q5T0L3 261 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 FDX2Q6P4F2 183 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 DTX2Q86UW9 622 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 COMMD2Q86X83 199 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 SVOPQ8N4V2 548 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 CMBLQ96DG6 245 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 REEP6Q96HR9 211 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 TRIM36Q9NQ86 728 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 ACOXLQ9NUZ1 547 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 BABAM2Q9NXR7 383 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 PRR14LQ5THK1 2151 aa17.25■□□□□ 0.35
USP53-203ENST00000507597 IGLV3-9A0A075B6K5 115 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 RAF1P04049 648 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 UBCP0CG48 685 aaKnown RBP17.24■□□□□ 0.35
USP53-203ENST00000507597 C21orf33P30042 268 aaPredicted RBP17.24■□□□□ 0.35
USP53-203ENST00000507597 TGM4P49221 684 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 WNT4P56705 351 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 NKPD1Q17RQ9 610 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 SNAI3Q3KNW1 292 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 TMEM244Q5VVB8 128 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 PRSS45Q7RTY3 260 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 ELMOD2Q8IZ81 293 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 SPRYD4Q8WW59 207 aaPredicted RBP17.24■□□□□ 0.35
USP53-203ENST00000507597 RORBQ92753 470 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 SPSB4Q96A44 273 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 CCL19Q99731 98 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 REPIN1Q9BWE0 567 aaKnown RBP17.24■□□□□ 0.35
USP53-203ENST00000507597 MRPL37Q9BZE1 423 aaKnown RBP17.24■□□□□ 0.35
USP53-203ENST00000507597 SLC22A4Q9H015 551 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 COMMD4Q9H0A8 199 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 DYNLRB1Q9NP97 96 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 TAAR3PQ9P1P4 343 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 LAMP3Q9UQV4 416 aa17.24■□□□□ 0.35
USP53-203ENST00000507597 A0A1W2PPR1 153 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 PRR32B1ATL7 298 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 MAGEB4O15481 346 aaPredicted RBP17.23■□□□□ 0.35
USP53-203ENST00000507597 TNFAIP8O95379 198 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 DANCRP0C864 163 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 KITLGP21583 273 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 DNASE1P24855 282 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 ERVS71-1P61550 626 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 ALKBH1Q13686 389 aaKnown RBP17.23■□□□□ 0.35
USP53-203ENST00000507597 GK2Q14410 553 aaPredicted RBP17.23■□□□□ 0.35
USP53-203ENST00000507597 GFOD2Q3B7J2 385 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 GLYATL3Q5SZD4 288 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 RPL22L1Q6P5R6 122 aaKnown RBP17.23■□□□□ 0.35
USP53-203ENST00000507597 CATSPERDQ86XM0 798 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 NANOGP1Q8N7R0 232 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 CSNK2A3Q8NEV1 391 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 OR8B12Q8NGG6 310 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 PELI1Q96FA3 418 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 TRMT61AQ96FX7 289 aaKnown RBP17.23■□□□□ 0.35
USP53-203ENST00000507597 DIRC2Q96SL1 478 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 SYT3Q9BQG1 590 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 ZNF649Q9BS31 505 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 RHNO1Q9BSD3 238 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 ERVK-18Q9QC07 812 aa17.23■□□□□ 0.35
USP53-203ENST00000507597 PURGQ9UJV8 347 aaKnown RBP17.23■□□□□ 0.35
USP53-203ENST00000507597 A0A1B0GVI7 797 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 M0R233 179 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 SRSF10O75494 262 aaKnown RBP17.22■□□□□ 0.35
USP53-203ENST00000507597 MAP2K3P46734 347 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 CHN2P52757 468 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 ZNF92Q03936 586 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 PSG7Q13046 419 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 KCTD21Q4G0X4 260 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 PAMR1Q6UXH9 720 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 OR2G2Q8NGZ5 317 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 NINJ1Q92982 152 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 SGK3Q96BR1 496 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 TRAF4Q9BUZ4 470 aaPredicted RBP17.22■□□□□ 0.35
USP53-203ENST00000507597 ISG20L2Q9H9L3 353 aaKnown RBP17.22■□□□□ 0.35
USP53-203ENST00000507597 CLEC2DQ9UHP7 191 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 FZR1Q9UM11 496 aa17.22■□□□□ 0.35
USP53-203ENST00000507597 LOC390937A0A1W2PQ73 354 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms