RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ZNF770Q6IQ21 691 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 C9orf139Q6ZV77 190 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 RHOUQ7L0Q8 258 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 DHFR2Q86XF0 187 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 ZDHHC22Q8N966 263 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 ZNF420Q8TAQ5 688 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 SLCO4A1Q96BD0 722 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 NSL1Q96IY1 281 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 MAP6Q96JE9 813 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 KCNJ15Q99712 375 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 TMEM246Q9BRR3 403 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 DGCR6LQ9BY27 220 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 MS4A7Q9GZW8 240 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 KIF17Q9P2E2 1029 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 CLN8Q9UBY8 286 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 PRPF19Q9UMS4 504 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 ARHGAP32A7KAX9 2087 aa12.09□□□□□ -0.47
HMGCS1-203ENST00000507004 DOCK11Q5JSL3 2073 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 IGHV2-70DA0A0C4DH43 119 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 GGT3PA6NGU5 568 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 RIIAD1A6NNX1 92 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 B2RBV5 119 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF878C9JN71 531 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 CLDN34H7C241 214 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 CYB5R3P00387 301 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 LIPFP07098 398 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF3P17036 446 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 CALB2P22676 271 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 CFL1P23528 166 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 PITPNBP48739 271 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 GRB2P62993 217 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 MICAQ29983 383 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 OR2T5Q6IEZ7 315 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 CD300LDQ6UXZ3 194 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 CYP2R1Q6VVX0 501 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 AQP11Q8NBQ7 271 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 SLC37A3Q8NCC5 494 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 OR9Q2Q8NGE9 314 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 OR2T29Q8NH02 315 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 UPRTQ96BW1 309 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 BTBD10Q9BSF8 475 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 TSSK6Q9BXA6 273 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 FN3KQ9H479 309 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 WDR76Q9H967 626 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 C14orf119Q9NWQ9 140 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 RNF7Q9UBF6 113 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 SAMHD1Q9Y3Z3 626 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 COMMD3-BMI1R4GMX3 469 aa12.08□□□□□ -0.48
HMGCS1-203ENST00000507004 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 KIR2DS1A0A191URI9 304 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 H0YL77 283 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 ENSAO43768 121 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 RGS9O75916 674 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 GASTP01350 101 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 HLA-DPB1P04440 258 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 PYCR1P32322 319 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 GRK5P34947 590 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 SEC61A1P61619 476 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 MAB21L1Q13394 359 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 DCXRQ7Z4W1 244 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 CYB561A3Q8NBI2 242 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 ERVK-18Q9QC07 812 aa12.07□□□□□ -0.48
HMGCS1-203ENST00000507004 TCRBV5S2A0A599 114 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 LGALS8O00214 317 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 SPARCP09486 303 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 HKR1P10072 659 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 RAP2AP10114 183 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 ATP6V1B2P21281 511 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 PAICSP22234 425 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 CD80P33681 288 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 PSMB10P40306 273 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 PAX2Q02962 417 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 CRMP1Q14194 572 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF362Q5T0B9 420 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 WDR25Q64LD2 544 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 SHFQ7M4L6 423 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 PARP8Q8N3A8 854 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 SIGLECL1Q8N7X8 197 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 OR52H1Q8NGJ2 320 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 TEX47Q8TBZ9 253 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 ITFG2Q969R8 447 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 SLC25A28Q96A46 364 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 SLAMF6Q96DU3 332 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 ASB9Q96DX5 294 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 ADAT1Q9BUB4 502 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 PLA2G12AQ9BZM1 189 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 NMNAT2Q9BZQ4 307 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 C1orf21Q9H246 121 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 CMC2Q9NRP2 79 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF69Q9UC07 566 aa12.06□□□□□ -0.48
HMGCS1-203ENST00000507004 TVP23AA6NH52 213 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 ANKRD30BLA7E2S9 258 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF593O00488 134 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 FAM20BO75063 409 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms