RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CTRB1P17538 263 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 USF1P22415 310 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 STOMP27105 288 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 TALDO1P37837 337 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 EIF1P41567 113 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 RAB7AP51149 207 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 GCSAMLQ5JQS6 135 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 BZW1Q7L1Q6 419 aaKnown RBP2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 ZNF645Q8N7E2 425 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 TMEM105Q8N8V8 129 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 OR10G6Q8NH81 332 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 DYNLL2Q96FJ2 89 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 CDX2Q99626 313 aaPredicted RBP2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 TMEM243Q9BU79 118 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 SLC7A5P2Q9GIP4 190 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 RAB20Q9NX57 234 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 C21orf62Q9NYP8 219 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 INSRP06213 1382 aa2.07□□□□□ -2.08
TOPBP1-204ENST00000505804 IGHV3-72A0A0B4J1Y9 119 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 A6NDN8 102 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 PDZK1P1A8MUH7 402 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 GABRPO00591 440 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 NME4O00746 187 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 FGFR1OPO95684 399 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 PAHP00439 452 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 HPRT1P00492 218 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 IGHV3-11P01762 117 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 RAB4AP20338 218 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 HMOX2P30519 316 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 NDUFA8P51970 172 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 UBE2MP61081 183 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 CUL2Q13617 745 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 YIF1BQ5BJH7 314 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 TWF2Q6IBS0 349 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 EIF3MQ7L2H7 374 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 CCDC148Q8NFR7 591 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 OR1J4Q8NGS1 313 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 HAUS1Q96CS2 278 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 BPIFA3Q9BQP9 254 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 UQCC2Q9BRT2 126 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 CCNB1IP1Q9NPC3 277 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 RHBDL2Q9NX52 303 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 RCL1Q9Y2P8 373 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 NSD2O96028 1365 aa2.06□□□□□ -2.08
TOPBP1-204ENST00000505804 KBTBD11-OT1A0A1B0GTJ5 212 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 M0R3G1 203 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 TNFRSF11BO00300 401 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 SERPINB7O75635 380 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 CYB5R3P00387 301 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 PGA4P0DJD7 388 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 PGA3P0DJD8 388 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 PGA5P0DJD9 388 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 TCP1P17987 556 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 BMI1P35226 326 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 RFC3P40938 356 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 PRLHRP49683 370 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 SERPINB8P50452 374 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 SIGLEC14Q08ET2 396 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 ILKQ13418 452 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 SLC39A6Q13433 755 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 PNOCQ13519 176 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 TEX30Q5JUR7 227 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 H3F3CQ6NXT2 135 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 TMEM53Q6P2H8 277 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 SSX9Q7RTT3 188 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 PQLC3Q8N755 202 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 ST20-AS1Q8NBB2 130 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 OR5T1Q8NG75 326 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 OR56A4Q8NGH8 313 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 C20orf96Q9NUD7 363 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 CLN6Q9NWW5 311 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 CLN8Q9UBY8 286 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 UBIAD1Q9Y5Z9 338 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 COMMD3-BMI1R4GMX3 469 aa2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 BRCA1P38398 1863 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-204ENST00000505804 IGKV1-27A0A075B6S5 117 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 KCNE1BA0A087WTH5 132 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 IGHV3-49A0A0A0MS15 119 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 IGHV3OR16-9A0A0B4J2B5 98 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 TSPAN11A1L157 253 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 ZNF233A6NK53 670 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 BTNL10A8MVZ5 291 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 GSTM3P21266 225 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 CD70P32970 193 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 NBL1P41271 181 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 SLC1A2P43004 574 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 PPIDQ08752 370 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 FUT5Q11128 374 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 TRMT5Q32P41 509 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 FAM222AQ5U5X8 452 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 HORMAD1Q86X24 394 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 ZNF101Q8IZC7 436 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 JAGN1Q8N5M9 183 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 OR4M1Q8NGD0 313 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 TSEN15Q8WW01 171 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 GHSRQ92847 366 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 RPEQ96AT9 228 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 BTN2A3PQ96KV6 586 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 C18orf15Q96N68 181 aa2.04□□□□□ -2.08
TOPBP1-204ENST00000505804 C11orf70Q9BRQ4 267 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms