RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ACOT13Q9NPJ3 140 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CBLN4Q9NTU7 201 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 BEX4Q9NWD9 120 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 A0A1W2PR80 420 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 M0R1B8 84 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 GPRIN2O60269 458 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 FADS2O95864 444 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 APLNRP35414 380 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 MPV17P39210 176 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 CD200P41217 278 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 GP2P55259 537 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 PPP1CBP62140 327 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 WDR38Q5JTN6 314 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 SMIM19Q96E16 107 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 MRPL37Q9BZE1 423 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 PBOV1Q9GZY1 135 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 Q9H521 79 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ACOXLQ9NUZ1 547 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 MYEF2Q9P2K5 600 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 STARD10Q9Y365 291 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ANKRD61A6NGH8 418 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 B9A039 149 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 E9PI62 339 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 CD79AP11912 226 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 GIFP27352 417 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 TGFBR2P37173 567 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 LIPAP38571 399 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 NAA10P41227 235 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 HTR5AP47898 357 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 TPTEP56180 551 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 WNT4P56705 351 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 RPS23P62266 143 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 PSG7Q13046 419 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF829Q3KNS6 432 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 LIPNQ5VXI9 398 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 RPL22L1Q6P5R6 122 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR10H5Q8NGA6 315 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 NEUROG1Q92886 237 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 MYDGFQ969H8 173 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 OPALINQ96PE5 141 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 CSMD1Q96PZ7 3565 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 DSCAML1Q8TD84 2053 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 GDI2P50395 445 aaKnown RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 KRTAP10-9P60411 292 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF92Q03936 586 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 PIGFQ07326 219 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 MLLT11Q13015 90 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 OTPQ5XKR4 325 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF367Q7RTV3 350 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ALDH16A1Q8IZ83 802 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 PARP16Q8N5Y8 322 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 LURAP1Q96LR2 239 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 MND1Q9BWT6 205 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZCCHC4Q9H5U6 513 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ABCB9Q9NP78 766 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 ERVK-18Q9QC07 812 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 TPRKBQ9Y3C4 175 aa7.07□□□□□ -1.28
CDC42SE2-208ENST00000505065 C5orf49A4QMS7 147 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 RP2O75695 350 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 C21orf33P30042 268 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 ALDH3B2P48448 385 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 IDH3GP51553 393 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR12D2P58182 307 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 PRSS57Q6UWY2 283 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 LRRN1Q6UXK5 716 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 ASCL4Q6XD76 172 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 WFDC8Q8IUA0 241 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 CDH26Q8IXH8 852 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 AKAP1Q92667 903 aaKnown RBP eCLIP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 DIRC2Q96SL1 478 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 CYSLTR2Q9NS75 346 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 BABAM2Q9NXR7 383 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 PLEK2Q9NYT0 353 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 SOD3P08294 240 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 MRPL3P09001 348 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 UBCP0CG48 685 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 SELEP16581 610 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 CHN2P52757 468 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 RIDAP52758 137 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 ALKBH1Q13686 389 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF787Q6DD87 383 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 COPS4Q9BT78 406 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 NDUFB11Q9NX14 153 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 MLNRO43193 412 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 LHBP01229 141 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 CRYAAP02489 173 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 ACHEP22303 614 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 CFL1P23528 166 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 ACKR3P25106 362 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 MPZP25189 248 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 TAS2R43P59537 309 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 ERVS71-1P61550 626 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 EMX1Q04741 257 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 PLP2Q04941 152 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 C11orf53Q8IXP5 236 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 PIK3IP1Q96FE7 263 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 C4orf36Q96KX1 117 aa7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 PURGQ9UJV8 347 aaKnown RBP7.06□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR52A1Q9UKL2 312 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms