RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RD3LP0DJH9 198 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF250P15622 560 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGFBP3P17936 291 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 DRD3P35462 400 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBM34P42696 430 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 MAGEA6P43360 314 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RORCP51449 518 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 XKP51811 444 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 HCCSP53701 268 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 WNT4P56705 351 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2B8PP59922 312 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RPL31P62899 125 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ST3GAL4Q11206 333 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 PSG7Q13046 419 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 FLOT2Q14254 428 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 MAD2L1BPQ15013 274 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 PON2Q15165 354 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 NSDHLQ15738 373 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF726P1Q15940 193 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 EXOC3L4Q17RC7 722 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF630Q2M218 657 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 BSXQ3C1V8 233 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 PAGE3Q5JUK9 113 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SDHAF4Q5VUM1 108 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 KHDRBS2Q5VWX1 349 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RESP18Q5W5W9 173 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 FRMPD2BQ6IN97 320 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 MBOAT2Q6ZWT7 520 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CBLN2Q8IUK8 224 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 BBS7Q8IWZ6 715 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 BOD1L2Q8IYS8 172 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CA13Q8N1Q1 262 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 PNKDQ8N490 385 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 Q8N7P7 452 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 WDR31Q8NA23 367 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 DCAF4L2Q8NA75 395 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ATP6V1C2Q8NEY4 427 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR51S1Q8NGJ8 323 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2Y1Q8NGV0 311 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CDC26Q8NHZ8 85 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 FANK1Q8TC84 345 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR51E1Q8TCB6 317 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 APH1BQ8WW43 257 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 FAM151AQ8WW52 585 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CPNE4Q96A23 557 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM230Q96A57 120 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CCDC127Q96BQ5 260 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RPUSD4Q96CM3 377 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM101Q96IK0 257 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SCGB3A2Q96PL1 93 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 TSG101Q99816 390 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 AGMATQ9BSE5 352 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RIOK2Q9BVS4 552 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 WDR55Q9H6Y2 383 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 METTL8Q9H825 291 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 PLGRKTQ9HBL7 147 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SIRT7Q9NRC8 400 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SDHAF2Q9NX18 166 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC39A1Q9NY26 324 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ANAPC11Q9NYG5 84 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CALYQ9NYX4 217 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 NYAP2Q9P242 653 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RPS6KB2Q9UBS0 482 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CFL2Q9Y281 166 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ASF1AQ9Y294 204 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 KCNE3Q9Y6H6 103 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 POLR3AO14802 1390 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 PLEKHG1Q9ULL1 1385 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 MROH7Q68CQ1 1323 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 MAPK8IP3Q9UPT6 1336 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 TRAV39A0A0B4J263 110 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 A0A1B0GVI7 797 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GOLGA8JA6NMD2 632 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ERVV-1B6SEH8 477 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 C12orf77C9JDV5 145 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ANKRD63C9JTQ0 380 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GOLGA8KD6RF30 607 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ANKRD65E5RJM6 399 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GOLGA8MH3BSY2 632 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 K7EN84 100 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 M0QXV9 152 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF593O00488 134 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GABRPO00591 440 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 NME4O00746 187 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 AGPAT2O15120 278 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 NUPL2O15504 423 aaKnown RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 AQP9O43315 295 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC16A7O60669 478 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 DPM1O60762 260 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 RCBTB2O95199 551 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 AIFM1O95831 613 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 HOXC4P09017 264 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 OCM2P0CE71 109 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GOLGA8HP0CJ92 632 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 GIMD1P0DJR0 217 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 PSKH1P11801 424 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 HLA-GP17693 338 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 CXCR2P25025 360 aa1.65□□□□□ -2.15
HMGB1P35-201ENST00000503360 F2RP25116 425 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms