RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 TP53I3Q53FA7 332 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 SMUG1Q53HV7 270 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 HSP90AA5PQ58FG0 334 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 SLC10A5Q5PT55 438 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 THEM4Q5T1C6 240 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 C1QTNF12Q5T7M4 302 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 OR2G6Q5TZ20 316 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CNIH2Q6PI25 160 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 KCNIP4Q6PIL6 250 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 SPINT4Q6UDR6 99 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 C16orf47Q6ZP98 133 aaPredicted RBP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ZNF493Q6ZR52 646 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ERASQ7Z444 233 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 HDDC2Q7Z4H3 204 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 TRIM69Q86WT6 500 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CALHM1Q8IU99 346 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 GRAMD2AQ8IUY3 354 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 RIMKLAQ8IXN7 391 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 PRSS58Q8IYP2 241 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ZNF683Q8IZ20 524 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ZADH2Q8N4Q0 377 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 LRRC52Q8N7C0 313 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 TMEM104Q8NE00 496 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CATSPER1Q8NEC5 780 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 OR4D5Q8NGN0 318 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 OR4S2Q8NH73 311 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 OR1F12Q8NHA8 337 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 TRMT10AQ8TBZ6 339 aaKnown RBP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 RNF139Q8WU17 664 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 RTN4IP1Q8WWV3 396 aaPredicted RBP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 RLN3Q8WXF3 142 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CTNNBL1Q8WYA6 563 aaPredicted RBP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 STMN2Q93045 179 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 UBE2E3Q969T4 207 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 NTAN1Q96AB6 310 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CXorf40BQ96DE9 158 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 MRPL38Q96DV4 380 aaKnown RBP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 L3HYPDHQ96EM0 354 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 C19orf60Q96EN9 201 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 IFT74Q96LB3 600 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 AMDHD1Q96NU7 426 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CAMK2N2Q96S95 79 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 RNF5Q99942 180 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 SLC25A2Q9BXI2 301 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CAPS2Q9BXY5 557 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 GABARAPL3Q9BY60 117 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 HSD3B7Q9H2F3 369 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 LRRN3Q9H3W5 708 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 C1orf198Q9H425 327 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 RWDD1Q9H446 243 aaPredicted RBP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 DBNDD1Q9H9R9 158 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 POLE3Q9NRF9 147 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 UFSP2Q9NUQ7 469 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 SIGLEC8Q9NYZ4 499 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 NINJ2Q9NZG7 142 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ACTR3BQ9P1U1 418 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 RNF14Q9UBS8 474 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CTSFQ9UBX1 484 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ENOPH1Q9UHY7 261 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 LAMP5Q9UJQ1 280 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ODF2LQ9ULJ1 636 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 MMP17Q9ULZ9 603 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 MFHAS1Q9Y4C4 1052 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 HYOU1Q9Y4L1 999 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 IKBKGQ9Y6K9 419 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 KIF16BQ96L93 1317 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 CENPJQ9HC77 1338 aaPredicted RBP0.28□□□□□ -2.36
SGMS1-205ENST00000498514 MTUS2Q5JR59 1369 aa0.28□□□□□ -2.36
SGMS1-205ENST00000498514 ANKRD50Q9ULJ7 1429 aa0.28□□□□□ -2.37
SGMS1-205ENST00000498514 HEATR5AQ86XA9 2040 aa0.28□□□□□ -2.37
SGMS1-205ENST00000498514 MPDZO75970 2070 aa0.28□□□□□ -2.37
SGMS1-205ENST00000498514 MALRD1Q5VYJ5 2156 aa0.28□□□□□ -2.37
SGMS1-205ENST00000498514 KIF1BO60333 1816 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 CENPVL3A0A0U1RRI6 287 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 A0A1B0GVI7 797 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 A0A1B0GVX0 72 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 A0A1B0GWJ7 208 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 PHGR1C9JFL3 82 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 SGK1O00141 431 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 BPY2O14599 106 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 HSD17B6O14756 317 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 XPO1O14980 1071 aaKnown RBP0.27□□□□□ -2.37
SGMS1-205ENST00000498514 CHMP2AO43633 222 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 ZNF207O43670 478 aaKnown RBP0.27□□□□□ -2.37
SGMS1-205ENST00000498514 OR1F1O43749 312 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 TBX19O60806 448 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 RAMP3O60896 148 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 SURF6O75683 361 aaKnown RBP0.27□□□□□ -2.37
SGMS1-205ENST00000498514 CCNKO75909 580 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 ATP5LO75964 103 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 TM7SF2O76062 418 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 RHOBTB1O94844 696 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 ERLIN2O94905 339 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 YIF1AO95070 293 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 PTBP3O95758 552 aaKnown RBP0.27□□□□□ -2.37
SGMS1-205ENST00000498514 MBD3O95983 291 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 IGHDP01880 384 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 HLA-DQA1P01909 254 aa0.27□□□□□ -2.37
SGMS1-205ENST00000498514 FABP3P05413 133 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms