RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 NKX2-6A6NCS4 301 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 FABP12A6NFH5 140 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 GRB2P62993 217 aaKnown RBP17.29■□□□□ 0.36
ACTN4-208ENST00000497637 TAF13Q15543 124 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 STK11Q15831 433 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 BCL2L15Q5TBC7 163 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 STAC2Q6ZMT1 411 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 SYT9Q86SS6 491 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 ELMOD2Q8IZ81 293 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 GJC3Q8NFK1 279 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 RND1Q92730 232 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 GFI1Q99684 422 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 SRRQ9GZT4 340 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 MOB1AQ9H8S9 216 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 BCO1Q9HAY6 547 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 ABCB10Q9NRK6 738 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 PARPBPQ9NWS1 579 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 SPRR3Q9UBC9 169 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 DAPK2Q9UIK4 370 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 HHLA2Q9UM44 414 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 PLEKHA6Q9Y2H5 1048 aa17.29■□□□□ 0.36
ACTN4-208ENST00000497637 FAM90A27PA6NNH2 459 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 RER1O15258 196 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 TBX1O43435 398 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 SLC2A2P11168 524 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 ATF1P18846 271 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 PSMD7P51665 324 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 PSMA6P60900 246 aaKnown RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 RNPS1Q15287 305 aaKnown RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 CNIH2Q6PI25 160 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 CHMP1BQ7LBR1 199 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 LYSMD2Q8IV50 215 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 GDPD1Q8N9F7 314 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 OR51A4Q8NGJ6 313 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 TSEN15Q8WW01 171 aaKnown RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 HTRA1Q92743 480 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 ORAI1Q96D31 301 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 CLEC4MQ9H2X3 399 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 LIME1Q9H400 295 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 GPR35Q9HC97 309 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 DDX28Q9NUL7 540 aaKnown RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 TMEM38BQ9NVV0 291 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 NUFIP1Q9UHK0 495 aaKnown RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 NOSIPQ9Y314 301 aaKnown RBP17.28■□□□□ 0.36
ACTN4-208ENST00000497637 V9GY05 133 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 HIVEP2P31629 2446 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 VPS13CQ709C8 3753 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 KIAA1549Q9HCM3 1950 aa17.28■□□□□ 0.36
ACTN4-208ENST00000497637 OR6C65A6NJZ3 312 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 TFECO14948 347 aaPredicted RBP17.27■□□□□ 0.36
ACTN4-208ENST00000497637 CST2P09228 141 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 UBCP0CG48 685 aaKnown RBP17.27■□□□□ 0.36
ACTN4-208ENST00000497637 ZNF79Q15937 498 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 ODF4Q2M2E3 257 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 FAM131AQ6UXB0 335 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 SNX29P2Q8IUI4 249 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 MINDY2Q8NBR6 621 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 TMEM106AQ96A25 262 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 ZNF837Q96EG3 531 aaPredicted RBP17.27■□□□□ 0.36
ACTN4-208ENST00000497637 CMTM3Q96MX0 182 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 PRRG4Q9BZD6 226 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 PBOV1Q9GZY1 135 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 CYSLTR2Q9NS75 346 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 FOXJ3Q9UPW0 622 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 DHDHQ9UQ10 334 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 ZNF175Q9Y473 711 aa17.27■□□□□ 0.36
ACTN4-208ENST00000497637 A0A1B0GVC2 190 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 IFITM5A6NNB3 132 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 AIPO00170 330 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 MRPL33O75394 65 aaKnown RBP17.26■□□□□ 0.35
ACTN4-208ENST00000497637 ZNF24P17028 368 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 HSD11B1P28845 292 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 RIN1Q13671 783 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 CCDC92Q53HC0 331 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-208ENST00000497637 DCDC5Q6ZRR9 648 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 LINGO2Q7L985 606 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 LRRC28Q86X40 367 aaPredicted RBP17.26■□□□□ 0.35
ACTN4-208ENST00000497637 CENPSQ8N2Z9 138 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 WFDC11Q8NEX6 87 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 FNDC9Q8TBE3 224 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 FAM57AQ8TBR7 257 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 TRMT10AQ8TBZ6 339 aaKnown RBP17.26■□□□□ 0.35
ACTN4-208ENST00000497637 KCNJ15Q99712 375 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 MRI1Q9BV20 369 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 SLCO5A1Q9H2Y9 848 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 PPP1R3EQ9H7J1 279 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 CRLF2Q9HC73 371 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 HCFC1P51610 2035 aa17.26■□□□□ 0.35
ACTN4-208ENST00000497637 TRAV8-7A0A075B6U6 113 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 LOC107986453A0A1B0GWG9 222 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 FAM25AB3EWG3 89 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 FAM25CB3EWG5 89 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 FAM25GB3EWG6 89 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 TTRP02766 147 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 CD2P06729 351 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 ADRA2CP18825 462 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 ELK1P19419 428 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 FSTP19883 344 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 OXA1LQ15070 435 aa17.25■□□□□ 0.35
ACTN4-208ENST00000497637 CEACAM16Q2WEN9 425 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms