RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PSMC5P62195 406 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ADARB1P78563 741 aaKnown RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC7A9P82251 487 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 PUDPQ08623 228 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF763Q0D2J5 394 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRDNQ13061 729 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMEM30BQ3MIR4 351 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 FFAR4Q5NUL3 377 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 CASC10Q5T4H9 136 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR52E8Q6IFG1 317 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF613Q6PF04 617 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 TTC23LQ6PF05 361 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 WDR74Q6RFH5 385 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMPRSS11AQ6ZMR5 421 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC26A11Q86WA9 606 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 NKAIN4Q8IVV8 208 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 SKA3Q8IX90 412 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC22A18ASQ8N1D0 253 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 C17orf78Q8N4C9 275 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZADH2Q8N4Q0 377 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF614Q8N883 585 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 C4orf32Q8N8J7 132 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ASCC1Q8N9N2 400 aaKnown RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 MAPK1IP1LQ8NDC0 245 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR51L1Q8NGJ5 315 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR1S2Q8NGQ3 325 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 CLHC1Q8NHS4 586 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 RFESDQ8TAC1 157 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 NUBPLQ8TB37 319 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 PYROXD1Q8WU10 500 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 PHF10Q8WUB8 498 aaKnown RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRUB1Q8WWH5 349 aaKnown RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 STMN2Q93045 179 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 OTUB2Q96DC9 234 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 PAGE5Q96GU1 130 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 CPB2Q96IY4 423 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 LITAFQ99732 161 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ATP5SQ99766 215 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 KLHDC3Q9BQ90 382 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZYG11BQ9C0D3 744 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 C20orf85Q9H1P6 137 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR51J1Q9H342 316 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 SP140LQ9H930 580 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 FGF22Q9HCT0 170 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 FGF20Q9NP95 211 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 NRBP2Q9NSY0 501 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 CLN6Q9NWW5 311 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 MED29Q9NX70 200 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 FBXL12Q9NXK8 326 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF282Q9UDV7 671 aaPredicted RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 CD300AQ9UGN4 299 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 KIF25Q9UIL4 384 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 KLHL21Q9UJP4 597 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMCO1Q9UM00 188 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 CPQQ9Y646 472 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 CDH10Q9Y6N8 788 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 SCN2AQ99250 2005 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 HUWE1Q7Z6Z7 4374 aaKnown RBP1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 DOCK10Q96BY6 2186 aa1.89□□□□□ -2.11
CKS1BP2-201ENST00000497342 STARD9Q9P2P6 4700 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CR1P17927 2039 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 PHF3Q92576 2039 aaKnown RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGHV1OR15-1A0A075B7D0 117 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGHV5-10-1A0A0J9YXX1 117 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 A0A1B0GUA9 196 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMEM120BA0PK00 339 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC22A20A6NK97 555 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 E9PLD3 99 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 PRAMEF26H0Y7S4 382 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 RAD51BO15315 384 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 RGS16O15492 202 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 AIREO43918 545 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC19A2O60779 497 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ERLIN2O94905 339 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC2A10O95528 541 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 BMP15O95972 392 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 FSHBP01225 129 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 MBP02144 154 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGKV2-30P06310 120 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 UBTFL1P0CB47 393 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 T-ENOLP0DO92 83 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 HSD17B1P14061 328 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 GFAPP14136 432 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 BCL3P20749 454 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZP3P21754 424 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CMA1P23946 247 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 IVDP26440 423 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CHRNB4P30926 498 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 CA5AP35218 305 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 RPL29P47914 159 aaKnown RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 BCAP31P51572 246 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ERVK-25P63136 954 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ACTG1P63261 375 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 UBE2IP63279 158 aaKnown RBP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 WDR43Q15061 677 aaKnown RBP eCLIP1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRIM16LQ309B1 348 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF718Q3SXZ3 478 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 PARP15Q460N3 678 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF876PQ49A33 203 aa1.88□□□□□ -2.11
CKS1BP2-201ENST00000497342 KLHL22Q53GT1 634 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms