RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 Q8TCH9 128 aa20.36■□□□□ 0.85
HLA-C-209ENST00000495835 COPS4Q9BT78 406 aa20.36■□□□□ 0.85
HLA-C-209ENST00000495835 TOR3AQ9H497 397 aa20.36■□□□□ 0.85
HLA-C-209ENST00000495835 SP140LQ9H930 580 aa20.36■□□□□ 0.85
HLA-C-209ENST00000495835 FBN3Q75N90 2809 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 ARHGAP32A7KAX9 2087 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 LOC105371242A0A075B767 164 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 CD300LBA8K4G0 201 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 H3BN98 237 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 GYPBP06028 91 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 SPARCP09486 303 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 EPHA1P21709 976 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 PAICSP22234 425 aaKnown RBP20.35■□□□□ 0.85
HLA-C-209ENST00000495835 ZFP36P26651 326 aaKnown RBP20.35■□□□□ 0.85
HLA-C-209ENST00000495835 RAD23AP54725 363 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 GRB2P62993 217 aaKnown RBP20.35■□□□□ 0.85
HLA-C-209ENST00000495835 TAF13Q15543 124 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 ESCO2Q56NI9 601 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 LYPD4Q6UWN0 246 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 KLBQ86Z14 1044 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 OR6K6Q8NGW6 343 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 JMJD8Q96S16 334 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 MARCH7Q9H992 704 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 ZNF556Q9HAH1 456 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 TMEM165Q9HC07 324 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 MIOXQ9UGB7 285 aa20.35■□□□□ 0.85
HLA-C-209ENST00000495835 XRCC2O43543 280 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 GLCEO94923 617 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 WNT2P09544 360 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 ANXA8P13928 327 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 DDOSTP39656 456 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 MAB21L1Q13394 359 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 FLOT2Q14254 428 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 SHFQ7M4L6 423 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 MOGAT3Q86VF5 341 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 SPERTQ8NA61 448 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 PAPD5Q8NDF8 572 aaKnown RBP20.34■□□□□ 0.85
HLA-C-209ENST00000495835 ZNF420Q8TAQ5 688 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-209ENST00000495835 CENPMQ9NSP4 180 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 MRPL15Q9P015 296 aaKnown RBP20.34■□□□□ 0.85
HLA-C-209ENST00000495835 PDP1Q9P0J1 537 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-209ENST00000495835 OPN4Q9UHM6 478 aa20.34■□□□□ 0.85
HLA-C-209ENST00000495835 CEACAM18A8MTB9 384 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 PTBP3O95758 552 aaKnown RBP20.33■□□□□ 0.85
HLA-C-209ENST00000495835 FSHBP01225 129 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 HLA-DPB1P04440 258 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 HMGN1P05114 100 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 CLUP10909 449 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 IRF2P14316 349 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 SRSF2Q01130 221 aaKnown RBP20.33■□□□□ 0.85
HLA-C-209ENST00000495835 ZNF92Q03936 586 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 SNAI3Q3KNW1 292 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 SEMA6DQ8NFY4 1073 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 OR11L1Q8NGX0 322 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 SPSB4Q96A44 273 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 SLC7A6OSQ96CW6 309 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-209ENST00000495835 INTS14Q96SY0 518 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 DNAJB9Q9UBS3 223 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 PPIAL4AQ9Y536 164 aa20.33■□□□□ 0.85
HLA-C-209ENST00000495835 TCRBV3S1A0A5B6 114 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 GGT3PA6NGU5 568 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 E2F6O75461 281 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 DNAJC8O75937 253 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-209ENST00000495835 CYB5R3P00387 301 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-209ENST00000495835 PSKH1P11801 424 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 OSMP13725 252 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 ZNF12P17014 697 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 GSTT1P30711 240 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 PRKXP51817 358 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 HILS1P60008 231 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 MZT1Q08AG7 82 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 OR8G1Q15617 311 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 ZNF404Q494X3 552 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 TMEM179BQ7Z7N9 219 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 SPATA24Q86W54 205 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 RNF133Q8WVZ7 376 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 DNAJC9Q8WXX5 260 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 PLEKHA8Q96JA3 519 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 SUCNR1Q9BXA5 334 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 INSIG2Q9Y5U4 225 aa20.32■□□□□ 0.84
HLA-C-209ENST00000495835 DOCK11Q5JSL3 2073 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 ANK2Q01484 3957 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 TRAPPC2LH3BP13 241 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 VENTXO95231 258 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 ADRA2CP18825 462 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 FPR2P25090 351 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 EIF2B1Q14232 305 aaKnown RBP20.31■□□□□ 0.84
HLA-C-209ENST00000495835 GLYATL3Q5SZD4 288 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 ZNF771Q7L3S4 317 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-209ENST00000495835 DPY19L4Q7Z388 723 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 DEFB108BQ8NET1 73 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 NRBF2Q96F24 287 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 TEX12Q9BXU0 123 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 OR5V1Q9UGF6 321 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 POMPQ9Y244 141 aa20.31■□□□□ 0.84
HLA-C-209ENST00000495835 PRR23D1E9PI22 279 aaPredicted RBP20.3■□□□□ 0.84
HLA-C-209ENST00000495835 PRODHO43272 600 aa20.3■□□□□ 0.84
HLA-C-209ENST00000495835 PRR23D2P0DMB1 279 aaPredicted RBP20.3■□□□□ 0.84
HLA-C-209ENST00000495835 PPIAL4GP0DN37 164 aa20.3■□□□□ 0.84
HLA-C-209ENST00000495835 CA6P23280 308 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms