RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PLSCR5A0PG75 271 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 CIB4A0PJX0 185 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 TRAPPC13A5PLN9 417 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ZNF724A8MTY0 619 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 H7C417 338 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 M0R1B8 84 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 TNFRSF11BO00300 401 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 GAGE7O76087 117 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 GADD45GO95257 159 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ATP6V1G2O95670 118 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 THY1P04216 161 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 H1F0P07305 194 aaKnown RBP5.5□□□□□ -1.53
VIM-207ENST00000495528 GAGE12FP0CL80 117 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 GAGE12GP0CL81 117 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 GAGE12IP0CL82 117 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 UQCRBP14927 111 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 PRKACGP22612 351 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 CXCR1P25024 350 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 PTAFRP25105 342 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 BDKRB2P30411 391 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 RRM2P31350 389 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ARL3P36405 182 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 SLC1A3P43003 542 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 EFNA4P52798 201 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 SPIBQ01892 262 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ST3GAL3Q11203 375 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 GAGE1Q13065 139 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 GAGE4Q13068 117 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 SELENBP1Q13228 472 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 RIPK1Q13546 671 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 QPRTQ15274 297 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 SLC25A53Q5H9E4 307 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 FBXW9Q5XUX1 488 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 WBP2NLQ6ICG8 309 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 KCTD18Q6PI47 426 aaPredicted RBP5.5□□□□□ -1.53
VIM-207ENST00000495528 TBPL2Q6SJ96 375 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 GALNT5Q7Z7M9 940 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 TMEM179BQ7Z7N9 219 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 NKAIN4Q8IVV8 208 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ZNF100Q8IYN0 542 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 LSMEM1Q8N8F7 131 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ICA1LQ8NDH6 482 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 FAM71CQ8NEG0 241 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 OR2AK2Q8NG84 335 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ADAMTS16Q8TE57 1224 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 TMEM234Q8WY98 164 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 SLC35B4Q969S0 331 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ORAI1Q96D31 301 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 RRNAD1Q96FB5 475 aaKnown RBP5.5□□□□□ -1.53
VIM-207ENST00000495528 SLC41A3Q96GZ6 507 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 CENPNQ96H22 339 aaPredicted RBP5.5□□□□□ -1.53
VIM-207ENST00000495528 HARBI1Q96MB7 349 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 MUS81Q96NY9 551 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 OR5B2Q96R09 309 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 EVA1AQ9H8M9 152 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 NTN4Q9HB63 628 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 EXOSC3Q9NQT5 275 aaKnown RBP5.5□□□□□ -1.53
VIM-207ENST00000495528 TMCC3Q9ULS5 477 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 SLC7A7Q9UM01 511 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 MGAT4BQ9UQ53 548 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 ANK2Q01484 3957 aa5.5□□□□□ -1.53
VIM-207ENST00000495528 TMED7-TICAM2A0A0A6YYA0 188 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 ZNF716A6NP11 495 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 G3V2T6 193 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 FMO6PO60774 539 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 E2F6O75461 281 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 OR5F1O95221 314 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 LYPD3O95274 346 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 PMS2P2O95744 297 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 HOXB6P17509 224 aaKnown RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 MAGEA2P43356 314 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 ARHGDIAP52565 204 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 SMIM11AP58511 58 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 RUNX1T1Q06455 604 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 SLC34A1Q06495 639 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 MERTKQ12866 999 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 GGTLC2Q14390 218 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 TRAM2Q15035 370 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 ATP6AP1Q15904 470 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 GABRA6Q16445 453 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 LRRC36Q1X8D7 754 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 CDONQ4KMG0 1287 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 FGD3Q5JSP0 725 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 LPCAT4Q643R3 524 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 FAM166AQ6J272 317 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 ZNF544Q6NX49 715 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 ZNF613Q6PF04 617 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 ULK3Q6PHR2 472 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 TTC33Q6PID6 262 aaPredicted RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 C1orf122Q6ZSJ8 110 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 TMPPEQ6ZT21 453 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 SSX8Q7RTT4 187 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 MEX3DQ86XN8 651 aaKnown RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 HS3ST5Q8IZT8 346 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 UBE2J2Q8N2K1 259 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 WDR31Q8NA23 367 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 TMEM255BQ8WV15 326 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 DNAJA4Q8WW22 397 aaPredicted RBP5.49□□□□□ -1.53
VIM-207ENST00000495528 SLC38A4Q969I6 547 aa5.49□□□□□ -1.53
VIM-207ENST00000495528 DNAJA3Q96EY1 480 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms