RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 H0YAE9 185 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 PHYHO14832 338 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 LILRA1O75019 489 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 NCR1O76036 304 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 IGHV1-46P01743 117 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 APOC1P02654 83 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 HPXP02790 462 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 LYNX1P0DP58 116 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 ISL1P61371 349 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 CCL8P80075 99 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF85Q03923 595 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 GFOD2Q3B7J2 385 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 C6orf52Q5T4I8 152 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 DEGS2Q6QHC5 323 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 SPNS3Q6ZMD2 512 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 PGAP1Q75T13 922 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 TFAP2CQ92754 450 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 PPP1R14AQ96A00 147 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 SGK3Q96BR1 496 aa16.56■□□□□ 0.24
HDAC4-212ENST00000495497 EXOGQ9Y2C4 368 aaKnown RBP16.56■□□□□ 0.24
HDAC4-212ENST00000495497 J3QRE1 110 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 ERCC1P07992 297 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-212ENST00000495497 RIDAP52758 137 aaKnown RBP16.55■□□□□ 0.24
HDAC4-212ENST00000495497 PSMA6P60900 246 aaKnown RBP16.55■□□□□ 0.24
HDAC4-212ENST00000495497 EGR3Q06889 387 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 MFGE8Q08431 387 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-212ENST00000495497 CARTPTQ16568 116 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 SPRNQ5BIV9 151 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 MRPL21Q7Z2W9 205 aaKnown RBP16.55■□□□□ 0.24
HDAC4-212ENST00000495497 TGIF2LYQ8IUE0 185 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 SETD9Q8NE22 299 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 NEU4Q8WWR8 484 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-212ENST00000495497 REEP6Q96HR9 211 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 REPIN1Q9BWE0 567 aaKnown RBP16.55■□□□□ 0.24
HDAC4-212ENST00000495497 NIPAL2Q9H841 368 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 FAM206AQ9NX38 181 aa16.55■□□□□ 0.24
HDAC4-212ENST00000495497 TMEM269A0A1B0GVZ9 245 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 XRCC2O43543 280 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF254O75437 659 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 RPP14O95059 124 aaKnown RBP16.54■□□□□ 0.24
HDAC4-212ENST00000495497 PNPP00491 289 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 MT-ND5P03915 603 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 DAOP14920 347 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 COL8A2P25067 703 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 TNK1Q13470 666 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 IL18R1Q13478 541 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 TIGD6Q17RP2 521 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF684Q5T5D7 378 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 DNM1P46Q6ZS02 220 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 C8orf59Q8N0T1 100 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-212ENST00000495497 YIPF7Q8N8F6 280 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 OR8G5Q8NG78 346 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 OR8B12Q8NGG6 310 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 SOX7Q9BT81 388 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 OR10A2Q9H208 303 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 SP140LQ9H930 580 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 CYSLTR2Q9NS75 346 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 MYRFQ9Y2G1 1151 aa16.54■□□□□ 0.24
HDAC4-212ENST00000495497 RPL36Q9Y3U8 105 aaKnown RBP16.54■□□□□ 0.24
HDAC4-212ENST00000495497 IGHV4-30-2A0A087WSY4 118 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 DAPL1A0PJW8 107 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 GGT3PA6NGU5 568 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 IQCF6A8MYZ5 107 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 H0YL77 283 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 SRSF10O75494 262 aaKnown RBP16.53■□□□□ 0.24
HDAC4-212ENST00000495497 KRT8P05787 483 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 SELEP16581 610 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 CDK5R2Q13319 367 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 TP53I3Q53FA7 332 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 OR2Z1Q8NG97 314 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 OR52H1Q8NGJ2 320 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 UBASH3BQ8TF42 649 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 SPSB4Q96A44 273 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 LYZL4Q96KX0 146 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 PBOV1Q9GZY1 135 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 GTF2A1LQ9UNN4 478 aa16.53■□□□□ 0.24
HDAC4-212ENST00000495497 METTL15A6NJ78 407 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 CD300LBA8K4G0 201 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 H0YJX3 145 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 TPD52L2O43399 206 aaKnown RBP16.52■□□□□ 0.24
HDAC4-212ENST00000495497 DCTDP32321 178 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 RBMXP38159 391 aaKnown RBP16.52■□□□□ 0.24
HDAC4-212ENST00000495497 LIPAP38571 399 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 FAM3AP98173 230 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 HNRNPA0Q13151 305 aaKnown RBP16.52■□□□□ 0.24
HDAC4-212ENST00000495497 ZNF829Q3KNS6 432 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-212ENST00000495497 LAIR2Q6ISS4 152 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 CLEC2AQ6UVW9 174 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 IZUMO2Q6UXV1 221 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 LHFPL3Q86UP9 236 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 CIARTQ8N365 385 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-212ENST00000495497 OR52I1Q8NGK6 324 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 SPRYD4Q8WW59 207 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-212ENST00000495497 FAM168AQ92567 244 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 YIPF5Q969M3 257 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 RHNO1Q9BSD3 238 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 VCX3BQ9H321 246 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 DECR2Q9NUI1 292 aa16.52■□□□□ 0.24
HDAC4-212ENST00000495497 CGGBP1Q9UFW8 167 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-212ENST00000495497 GNG8Q9UK08 70 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms