RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	CTSF	Q9UBX1	484 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	EFS	O43281	561 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SCGN	O76038	276 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	NME1	P15531	152 aa	Known RBP	11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ABO	P16442	354 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR3A2	P47893	321 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CLRN1	P58418	232 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TAS2R31	P59538	309 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TDG	Q13569	410 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	NKAPL	Q5M9Q1	402 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RTN4RL2	Q86UN3	420 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ARL11	Q969Q4	196 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	DDIT4L	Q96D03	193 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RAB3C	Q96E17	227 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	BARX1	Q9HBU1	254 aa	Predicted RBP	11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CHST11	Q9NPF2	352 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GSKIP	Q9P0R6	139 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SLC5A6	Q9Y289	635 aa		11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.96	□□□□□ -0.5
SUPT20H-222	ENST00000495071	LOC390937	A0A1W2PQ73	354 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SRSF10	O75494	262 aa	Known RBP	11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HTR3B	O95264	441 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	IGHM	P01871	453 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CRH	P06850	196 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	EFNA3	P52797	238 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM71	Q6P5X7	295 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GALNTL5	Q7Z4T8	443 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SPAG16	Q8N0X2	631 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ADAT1	Q9BUB4	502 aa	Known RBP	11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PRR13	Q9NZ81	148 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	WIPF3	A6NGB9	483 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	T	O15178	435 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CYCS	P99999	105 aa	Known RBP	11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF585A	Q6P3V2	769 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	BAP18	Q8IXM2	172 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR5AP2	Q8NGF4	316 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR2I1P	Q8NGU4	316 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	WNT2B	Q93097	391 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM231	Q9H6L2	316 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CYB5R1	Q9UHQ9	305 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CABIN1	Q9Y6J0	2220 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM218	A2RU14	115 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CRTAP	O75718	401 aa	Predicted RBP	11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FOLR1	P15328	257 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PVALB	P20472	110 aa	Predicted RBP	11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	S100A10	P60903	97 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FAM219A	Q8IW50	185 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	DTWD2	Q8NBA8	298 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR5T2	Q8NGG2	359 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	KCNK17	Q96T54	332 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	UQCC2	Q9BRT2	126 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ST6GALNAC5	Q9BVH7	336 aa		11.95	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FTCDNL1	E5RQL4	147 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	IL2RA	P01589	272 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	AMY2B	P19961	511 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CLDN6	P56747	220 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RNF4	P78317	190 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	C17orf67	Q0P5P2	114 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FOXF1	Q12946	379 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	C14orf28	Q4W4Y0	310 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR5H2	Q8NGV7	314 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TERB2	Q8NHR7	220 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MFSD8	Q8NHS3	518 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM59	Q9BXS4	323 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ELL3	Q9HB65	397 aa	Predicted RBP	11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FAM206A	Q9NX38	181 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ADAP1	O75689	374 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GLUL	P15104	373 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	UQCC3	Q6UW78	93 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	NPRL2	Q8WTW4	380 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RNF141	Q8WVD5	230 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ROBO4	Q8WZ75	1007 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MRGPRF	Q96AM1	343 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PIK3IP1	Q96FE7	263 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CPNE2	Q96FN4	548 aa	Predicted RBP	11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FAHD2A	Q96GK7	314 aa		11.94	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	CDA	P32320	146 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	RPL35	P42766	123 aa	Known RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF41	P51814	821 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	FLI1	Q01543	452 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SGCA	Q16586	387 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	GUCA2B	Q16661	112 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	WDFY1	Q8IWB7	410 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	PUSL1	Q8N0Z8	303 aa	Known RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM104	Q8NE00	496 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	OR5D18	Q8NGL1	313 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	WBP1L	Q9NX94	342 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071		A0A1B0GX78	115 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SOCS1	O15524	211 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MYF5	P13349	255 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TBP	P20226	339 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	SRSF4	Q08170	494 aa	Known RBP	11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	MICB	Q29980	383 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMEM128	Q5BJH2	165 aa		11.93	□□□□□ -0.5
SUPT20H-222	ENST00000495071	TMPPE	Q6ZT21	453 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms