RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	LALBA	P00709	142 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	TTR	P02766	147 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	TFAP2A	P05549	437 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	CD2	P06729	351 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	SLC2A1	P11166	492 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	CCL1	P22362	96 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	NR4A1	P22736	598 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	GRN	P28799	593 aa	Known RBP	11.71	□□□□□ -0.53
APTX-231	ENST00000494973	GLRX	P35754	106 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	UCP2	P55851	309 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	SELENOV	P59797	346 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	SLC3A1	Q07837	685 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	BLMH	Q13867	455 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.71	□□□□□ -0.53
APTX-231	ENST00000494973	LIPK	Q5VXJ0	399 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	MRPL21	Q7Z2W9	205 aa	Known RBP	11.71	□□□□□ -0.53
APTX-231	ENST00000494973	OR13F1	Q8NGS4	319 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	LINC01560	Q8TB33	94 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	PHYHIP	Q92561	330 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	GHSR	Q92847	366 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	SPSB4	Q96A44	273 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	SLC22A13	Q9Y226	551 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	RNF115	Q9Y4L5	304 aa		11.71	□□□□□ -0.53
APTX-231	ENST00000494973	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	LOC107986453	A0A1B0GWG9	222 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	ABCD4	O14678	606 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	SYT7	O43581	403 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	GATB	O75879	557 aa	Known RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	CCL2	P13500	99 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	DDOST	P39656	456 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	KIR3DL2	P43630	455 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	GTF2A1	P52655	376 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	GP2	P55259	537 aa	Known RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	NANOS3	P60323	173 aa	Known RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	PPP1CB	P62140	327 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	BSPH1	Q075Z2	132 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	SNTB2	Q13425	540 aa	Known RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	MOG	Q16653	247 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF718	Q3SXZ3	478 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	ZBTB37	Q5TC79	503 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	SLC22A25	Q6T423	547 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	MEX3B	Q6ZN04	569 aa	Known RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	GDPGP1	Q6ZNW5	385 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	PRSS35	Q8N3Z0	413 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	ACBD4	Q8NC06	268 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	OR1J1	Q8NGS3	322 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	PLPPR2	Q96GM1	343 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	REEP6	Q96HR9	211 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	PGLYRP3	Q96LB9	341 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	BCL7B	Q9BQE9	202 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF442	Q9H7R0	627 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	PLEKHA1	Q9HB21	404 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	CRIM1	Q9NZV1	1036 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	NDUFA13	Q9P0J0	144 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	POU2F3	Q9UKI9	436 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	STUB1	Q9UNE7	303 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	NOP16	Q9Y3C1	178 aa	Known RBP	11.7	□□□□□ -0.54
APTX-231	ENST00000494973	N6AMT1	Q9Y5N5	214 aa		11.7	□□□□□ -0.54
APTX-231	ENST00000494973	DPRX	A6NFQ7	191 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	PYCARD-AS1	I3L0S3	204 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	DHRS3	O75911	302 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	RGS9	O75916	674 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	IGLV3-1	P01715	115 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	RAC2	P15153	192 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	CD36	P16671	472 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	GCH1	P30793	250 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	WNT5A	P41221	380 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	MAP2K3	P46734	347 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	HGFAC	Q04756	655 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	DAZAP2	Q15038	168 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	SNAI3	Q3KNW1	292 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973		Q499Y3	187 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	FBXW12	Q6X9E4	464 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	RFPL4B	Q6ZWI9	263 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	PGAP1	Q75T13	922 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	MYPOP	Q86VE0	399 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	ZFP41	Q8N8Y5	198 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	CSNK2A3	Q8NEV1	391 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	TSEN15	Q8WW01	171 aa	Known RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	RNF166	Q96A37	237 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	TECTB	Q96PL2	329 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	NEK6	Q9HC98	313 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	ABCB9	Q9NP78	766 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	GPR84	Q9NQS5	396 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	BATF3	Q9NR55	127 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	GPR160	Q9UJ42	338 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	FBXO9	Q9UK97	447 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-231	ENST00000494973	SSR3	Q9UNL2	185 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	DHDH	Q9UQ10	334 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	GSTK1	Q9Y2Q3	226 aa		11.69	□□□□□ -0.54
APTX-231	ENST00000494973	HEATR1	Q9H583	2144 aa	Known RBP	11.68	□□□□□ -0.54
APTX-231	ENST00000494973	PNMA8C	A0A1B0GUJ8	204 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	hCG_38984	A0A1B0GV85	526 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	SMIM31	A0A1B0GVY4	71 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF879	B4DU55	563 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	ATP6V1G2-DDX39B	F2Z307	99 aa		11.68	□□□□□ -0.54
APTX-231	ENST00000494973	ARL6IP5	O75915	188 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms