RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 HSP90B2PQ58FF3 399 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 CD276Q5ZPR3 534 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 BRD3OSQ6XYD6 125 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 C19orf18Q8NEA5 215 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 TAF15Q92804 592 aaKnown RBP eCLIP19.33■□□□□ 0.68
COL27A1-208ENST00000494780 MCUR1Q96AQ8 359 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 ZNF799Q96GE5 643 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 MAP6Q96JE9 813 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 FN3KQ9H479 309 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 NOX4Q9NPH5 578 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 MAGEL2Q9UJ55 1249 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 TRRAPQ9Y4A5 3859 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 CD300LBA8K4G0 201 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 SRRM5B3KS81 715 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 GMDSO60547 372 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 PTBP3O95758 552 aaKnown RBP19.32■□□□□ 0.68
COL27A1-208ENST00000494780 ZNF823P16415 610 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 CA6P23280 308 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL27A1-208ENST00000494780 ZNF620Q6ZNG0 422 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 PLPP7Q8NBV4 271 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 GNPDA2Q8TDQ7 276 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 ERVK-18Q9QC07 812 aa19.32■□□□□ 0.68
COL27A1-208ENST00000494780 A0A1B0GUS0 222 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 LGALS8O00214 317 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 LIPFP07098 398 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 TSPAN31Q12999 210 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 ZNF362Q5T0B9 420 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-208ENST00000494780 SLC35F1Q5T1Q4 408 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 TECTBQ96PL2 329 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 ADAT1Q9BUB4 502 aaKnown RBP19.31■□□□□ 0.68
COL27A1-208ENST00000494780 MMADHCQ9H3L0 296 aaPredicted RBP19.31■□□□□ 0.68
COL27A1-208ENST00000494780 TRIM36Q9NQ86 728 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 KIF17Q9P2E2 1029 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 CTSZQ9UBR2 303 aa19.31■□□□□ 0.68
COL27A1-208ENST00000494780 GGT3PA6NGU5 568 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 ZNF879B4DU55 563 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 P2RY10O00398 339 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 FABP3P05413 133 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 HSD17B1P14061 328 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 OMGP23515 440 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 RRM2P31350 389 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 OTX1P32242 354 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-208ENST00000494780 CFHR2P36980 270 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 ZNF92Q03936 586 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 Q6YL49 198 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 SPERTQ8NA61 448 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 PCGF1Q9BSM1 259 aa19.3■□□□□ 0.68
COL27A1-208ENST00000494780 NSRP1Q9H0G5 558 aaKnown RBP19.3■□□□□ 0.68
COL27A1-208ENST00000494780 MRPL15Q9P015 296 aaKnown RBP19.3■□□□□ 0.68
COL27A1-208ENST00000494780 FAM181BA6NEQ2 426 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 NDUFA2O43678 99 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 SNAI3Q3KNW1 292 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 SFRP4Q6FHJ7 346 aaPredicted RBP19.29■□□□□ 0.68
COL27A1-208ENST00000494780 RPL13AP3Q6NVV1 102 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 PGBD2Q6P3X8 592 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 DRAM2Q6UX65 266 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 TMEM86BQ8N661 226 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 PROKR2Q8NFJ6 384 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 OR52L1Q8NGH7 329 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 OR2T4Q8NH00 348 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 NSMCE2Q96MF7 247 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 DDOQ99489 341 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 ELAC2Q9BQ52 826 aaKnown RBP19.29■□□□□ 0.68
COL27A1-208ENST00000494780 BEX1Q9HBH7 125 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 MED4Q9NPJ6 270 aa19.29■□□□□ 0.68
COL27A1-208ENST00000494780 TRAV38-1A0A0B4J264 116 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 TNFRSF13BO14836 293 aaPredicted RBP19.28■□□□□ 0.68
COL27A1-208ENST00000494780 CRYBA1P05813 215 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 PYCR1P32322 319 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 HOXA4Q00056 320 aaPredicted RBP19.28■□□□□ 0.68
COL27A1-208ENST00000494780 OR8B8Q15620 311 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 GLYATL3Q5SZD4 288 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 RUSC1-AS1Q66K80 236 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 BOLLQ8N9W6 283 aaKnown RBP19.28■□□□□ 0.68
COL27A1-208ENST00000494780 OR4C15Q8NGM1 316 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 OR4F5Q8NH21 305 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 OR2AE1Q8NHA4 323 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 FAM71F1Q96KD3 344 aaPredicted RBP19.28■□□□□ 0.68
COL27A1-208ENST00000494780 TBX15Q96SF7 602 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 IL1RAPQ9NPH3 570 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 CDH10Q9Y6N8 788 aa19.28■□□□□ 0.68
COL27A1-208ENST00000494780 OOEPA6NGQ2 149 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 TVP23AA6NH52 213 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 C3orf80F5H4A9 247 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 BHLHE40O14503 412 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 ADAM20O43506 726 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 TOX4O94842 621 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 SFTPBP07988 381 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 MMP9P14780 707 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 RPS27P42677 84 aaKnown RBP19.27■□□□□ 0.68
COL27A1-208ENST00000494780 MZT1Q08AG7 82 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 SAMD4BQ5PRF9 694 aaKnown RBP19.27■□□□□ 0.68
COL27A1-208ENST00000494780 FIP1L1Q6UN15 594 aaKnown RBP19.27■□□□□ 0.68
COL27A1-208ENST00000494780 PNLDC1Q8NA58 520 aaKnown RBP19.27■□□□□ 0.68
COL27A1-208ENST00000494780 CYB561A3Q8NBI2 242 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 WDFY2Q96P53 400 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 OPA3Q9H6K4 179 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 EGLN3Q9H6Z9 239 aa19.27■□□□□ 0.68
COL27A1-208ENST00000494780 MARCH7Q9H992 704 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms