RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ZNF92Q03936 586 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 GLYATL3Q5SZD4 288 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 PLBD1Q6P4A8 553 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 DPY19L4Q7Z388 723 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 MOGAT3Q86VF5 341 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 LRRC28Q86X40 367 aaPredicted RBP27.96■■■□□ 2.07
CBX4-203ENST00000494546 OR4M2Q8NGB6 313 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 METRNQ9UJH8 293 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 DNHD1Q96M86 4753 aa27.96■■■□□ 2.07
CBX4-203ENST00000494546 PRR23D1E9PI22 279 aaPredicted RBP27.95■■■□□ 2.06
CBX4-203ENST00000494546 IFNL4K9M1U5 179 aa27.95■■■□□ 2.06
CBX4-203ENST00000494546 PRR23D2P0DMB1 279 aaPredicted RBP27.95■■■□□ 2.06
CBX4-203ENST00000494546 TMEM155Q4W5P6 130 aa27.95■■■□□ 2.06
CBX4-203ENST00000494546 DCAF12L2Q5VW00 463 aa27.95■■■□□ 2.06
CBX4-203ENST00000494546 MXRA5Q9NR99 2828 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 A0A1B0GWJ7 208 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 GGT3PA6NGU5 568 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 CD300LBA8K4G0 201 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 TIPRLO75663 272 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 CYB5R3P00387 301 aaPredicted RBP27.94■■■□□ 2.06
CBX4-203ENST00000494546 HMGN1P05114 100 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 SLC15A1P46059 708 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 KRTAP24-1Q3LI83 254 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 ZMYND19Q96E35 227 aaPredicted RBP27.94■■■□□ 2.06
CBX4-203ENST00000494546 NTN4Q9HB63 628 aa27.94■■■□□ 2.06
CBX4-203ENST00000494546 PATZ1Q9HBE1 687 aaKnown RBP27.94■■■□□ 2.06
CBX4-203ENST00000494546 ZNF205O95201 554 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 AVPP01185 164 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 MDH2P40926 338 aaKnown RBP27.93■■■□□ 2.06
CBX4-203ENST00000494546 RASSF2P50749 326 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 RAD23AP54725 363 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 GRB2P62993 217 aaKnown RBP27.93■■■□□ 2.06
CBX4-203ENST00000494546 KLHL12Q53G59 568 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 RFLNBQ8N5W9 214 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 ABHD6Q9BV23 337 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 REPIN1Q9BWE0 567 aaKnown RBP27.93■■■□□ 2.06
CBX4-203ENST00000494546 KIF17Q9P2E2 1029 aa27.93■■■□□ 2.06
CBX4-203ENST00000494546 LOC105371242A0A075B767 164 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 FOXH1O75593 365 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 CA6P23280 308 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 HSD11B1P28845 292 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 CX3CR1P49238 355 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 CDK5Q00535 292 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 OR8G1Q15617 311 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 LIPNQ5VXI9 398 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 TMEM236Q5W0B7 351 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 C1orf229Q6ZS94 237 aaPredicted RBP27.92■■■□□ 2.06
CBX4-203ENST00000494546 SHFQ7M4L6 423 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 PLEKHA8Q96JA3 519 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 TMPRSS13Q9BYE2 586 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 OCEL1Q9H607 264 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 MARCH7Q9H992 704 aa27.92■■■□□ 2.06
CBX4-203ENST00000494546 LRRC30A6NM36 301 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 J3QLI3 93 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 TBX1O43435 398 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 TCF21O43680 179 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 ZFP36P26651 326 aaKnown RBP27.91■■■□□ 2.06
CBX4-203ENST00000494546 MAB21L1Q13394 359 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 CPOQ8IVL8 374 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 TIGD4Q8IY51 512 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 MUC20Q8N307 709 aaPredicted RBP27.91■■■□□ 2.06
CBX4-203ENST00000494546 TEX12Q9BXU0 123 aa27.91■■■□□ 2.06
CBX4-203ENST00000494546 ANXA2P07355 339 aaKnown RBP27.9■■■□□ 2.06
CBX4-203ENST00000494546 PMELP40967 661 aa27.9■■■□□ 2.06
CBX4-203ENST00000494546 SEC61A1P61619 476 aaKnown RBP27.9■■■□□ 2.06
CBX4-203ENST00000494546 TEX29Q8N6K0 151 aa27.9■■■□□ 2.06
CBX4-203ENST00000494546 RNF133Q8WVZ7 376 aa27.9■■■□□ 2.06
CBX4-203ENST00000494546 NRBF2Q96F24 287 aa27.9■■■□□ 2.06
CBX4-203ENST00000494546 AMELYQ99218 206 aa27.9■■■□□ 2.06
CBX4-203ENST00000494546 SLC22A4Q9H015 551 aa27.9■■■□□ 2.06
CBX4-203ENST00000494546 TOR3AQ9H497 397 aa27.9■■■□□ 2.06
CBX4-203ENST00000494546 PAPOLBQ9NRJ5 636 aaKnown RBP27.9■■■□□ 2.06
CBX4-203ENST00000494546 NOP16Q9Y3C1 178 aaKnown RBP27.9■■■□□ 2.06
CBX4-203ENST00000494546 ATP5HO75947 161 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 GATA3P23771 443 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 CD200P41217 278 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 ZNF181Q2M3W8 571 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 PRAMEF6Q5VXH4 476 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 CELF2-AS1Q8N7Q2 184 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 UTP4Q969X6 686 aaKnown RBP27.89■■■□□ 2.06
CBX4-203ENST00000494546 ADAT1Q9BUB4 502 aaKnown RBP27.89■■■□□ 2.06
CBX4-203ENST00000494546 C7orf69Q9H7B7 122 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 UFSP2Q9NUQ7 469 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 DNAJC27Q9NZQ0 273 aa27.89■■■□□ 2.06
CBX4-203ENST00000494546 CEACAM18A8MTB9 384 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 XRCC2O43543 280 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 SELENOFO60613 162 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 IRF2P14316 349 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 GATA4P43694 442 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 RPS7P62081 194 aaKnown RBP27.88■■■□□ 2.05
CBX4-203ENST00000494546 C1orf87Q8N0U7 546 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 BBS1Q8NFJ9 593 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 OR56B2PQ8NGI1 322 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 DNAJC9Q8WXX5 260 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 DVL3Q92997 716 aaPredicted RBP27.88■■■□□ 2.05
CBX4-203ENST00000494546 OPA3Q9H6K4 179 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 SLC25A19Q9HC21 320 aa27.88■■■□□ 2.05
CBX4-203ENST00000494546 PRODHO43272 600 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 ADRA2CP18825 462 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 SCGB2A2Q13296 93 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms