RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 LIPCP11150 499 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 CSNK2A2P19784 350 aaPredicted RBP6.33□□□□□ -1.4
EPHA3-203ENST00000494014 GABRR1P24046 479 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 CXCR1P25024 350 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 MSX1P28360 303 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 PDX1P52945 283 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 POLR2LP62875 67 aaKnown RBP6.33□□□□□ -1.4
EPHA3-203ENST00000494014 DUSP8Q13202 625 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 LY6G5CQ5SRR4 150 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 SAPCD1Q5SSQ6 148 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 GGNBP1Q5YKI7 109 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 WDR88Q6ZMY6 472 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 KDM8Q8N371 416 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 LILRA3Q8N6C8 439 aaPredicted RBP6.33□□□□□ -1.4
EPHA3-203ENST00000494014 OR51A7Q8NH64 312 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 OR5K2Q8NHB8 316 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 SLC22A18Q96BI1 424 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF775Q96BV0 537 aaPredicted RBP6.33□□□□□ -1.4
EPHA3-203ENST00000494014 MVB12AQ96EY5 273 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 BSCL2Q96G97 398 aaPredicted RBP6.33□□□□□ -1.4
EPHA3-203ENST00000494014 PDE7BQ9NP56 450 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 MEMO1Q9Y316 297 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 WDR45Q9Y484 360 aa6.33□□□□□ -1.4
EPHA3-203ENST00000494014 TRAV8-7A0A075B6U6 113 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 EREGO14944 169 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 NUDT21O43809 227 aaKnown RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ERAL1O75616 437 aaKnown RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 NDUFB2O95178 105 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 GCGP01275 180 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 SNRPCP09234 159 aaKnown RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 CD37P11049 281 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF28P17035 718 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 PTNP21246 168 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 REEP5Q00765 189 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 SSPNQ14714 243 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 EBPQ15125 230 aaKnown RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 MIDNQ504T8 468 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 OR4C11Q6IEV9 310 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 OR2T2Q6IF00 324 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF627Q7L945 461 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF615Q8N8J6 731 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 TMEM106AQ96A25 262 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 SLC41A2Q96JW4 573 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF587Q96SQ5 575 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 DPEP2Q9H4A9 486 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 CRLF2Q9HC73 371 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 STRAPQ9Y3F4 350 aaKnown RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 DCHS1Q96JQ0 3298 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 TMEM235A6NFC5 223 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF354AO60765 605 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 UPK3AO75631 287 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 IRF1P10914 325 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 CD59P13987 128 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 EDN3P14138 238 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 AK4P27144 223 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 SSR2P43308 183 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 SUCLG1P53597 346 aaKnown RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ELOBQ15370 118 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 SOHLH1Q5JUK2 328 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 DCAF10Q5QP82 559 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 FAM166AQ6J272 317 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 LANCL3Q6ZV70 420 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 TTLL10Q6ZVT0 673 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 MDGA2Q7Z553 956 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF676Q8N7Q3 588 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 OR4K13Q8NH42 304 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 DTD1Q8TEA8 209 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 MCHR2Q969V1 340 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 RNF166Q96A37 237 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 C2orf50Q96LR7 162 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 TNFRSF13CQ96RJ3 184 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 CCNL2Q96S94 520 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 SLC25A31Q9H0C2 315 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 WSB2Q9NYS7 404 aaPredicted RBP6.32□□□□□ -1.4
EPHA3-203ENST00000494014 OR5AC2Q9NZP5 309 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 LAMP5Q9UJQ1 280 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 PITPNC1Q9UKF7 332 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 AMDHD2Q9Y303 409 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 TMED7Q9Y3B3 224 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 ATG4BQ9Y4P1 393 aa6.32□□□□□ -1.4
EPHA3-203ENST00000494014 A0A087WZY1 265 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 FCMRO60667 390 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 DFFBO76075 338 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 ZIC2O95409 532 aaPredicted RBP6.31□□□□□ -1.4
EPHA3-203ENST00000494014 DBIP07108 87 aaKnown RBP6.31□□□□□ -1.4
EPHA3-203ENST00000494014 OR5AC1P0C628 307 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 SEC11BP0C7V7 166 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 HIST1H1CP16403 213 aaKnown RBP6.31□□□□□ -1.4
EPHA3-203ENST00000494014 AKR1C4P17516 323 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 CD200P41217 278 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 BPIFB3P59826 476 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 RASGEF1BQ0VAM2 473 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 ZNHIT3Q15649 155 aaPredicted RBP6.31□□□□□ -1.4
EPHA3-203ENST00000494014 ISXQ2M1V0 245 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 TMEM128Q5BJH2 165 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 TMEM220Q6QAJ8 160 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF664Q8N3J9 261 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 SUMF2Q8NBJ7 301 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 ZNF563Q8TA94 476 aa6.31□□□□□ -1.4
EPHA3-203ENST00000494014 SCAMP4Q969E2 229 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms