RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 RIBC2Q9H4K1 309 aa13.68□□□□□ -0.22
SATB1-217ENST00000493952 IL19Q9UHD0 177 aa13.68□□□□□ -0.22
SATB1-217ENST00000493952 N6AMT1Q9Y5N5 214 aa13.68□□□□□ -0.22
SATB1-217ENST00000493952 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 CLDN25C9JDP6 229 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 H0YL77 283 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 ALPLP05186 524 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 ANXA2P07355 339 aaKnown RBP13.67□□□□□ -0.22
SATB1-217ENST00000493952 MRPL3P09001 348 aaKnown RBP13.67□□□□□ -0.22
SATB1-217ENST00000493952 SELEP16581 610 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 RBMXP38159 391 aaKnown RBP13.67□□□□□ -0.22
SATB1-217ENST00000493952 HCCSP53701 268 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 MVKQ03426 396 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 SLC16A9Q7RTY1 509 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 PRSS45Q7RTY3 260 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 OR13G1Q8NGZ3 307 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 TMEM163Q8TC26 289 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 THEM6Q8WUY1 208 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 OR2V2Q96R30 315 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 IL4I1Q96RQ9 567 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 S100A14Q9HCY8 104 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 DNAJC27Q9NZQ0 273 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 WIPI2Q9Y4P8 454 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 ARHGAP32A7KAX9 2087 aa13.67□□□□□ -0.22
SATB1-217ENST00000493952 LOC100289279A0A1B0GTE1 492 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 A0A1B0GWJ7 208 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 EI24O14681 340 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 HLA-DPB1P04440 258 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 H2BFMP0C1H6 154 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 TNFRSF1AP19438 455 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 ZNF121P58317 390 aaPredicted RBP13.66□□□□□ -0.22
SATB1-217ENST00000493952 AADACL4Q5VUY2 407 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 NXNL2Q5VZ03 156 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 MEPCEQ7L2J0 689 aaKnown RBP13.66□□□□□ -0.22
SATB1-217ENST00000493952 C10orf67Q8IYJ2 551 aa13.66□□□□□ -0.22
SATB1-217ENST00000493952 REPIN1Q9BWE0 567 aaKnown RBP13.66□□□□□ -0.22
SATB1-217ENST00000493952 CD300LBA8K4G0 201 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 F5H5P2 479 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 TBX1O43435 398 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 XRCC2O43543 280 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 CRLF1O75462 422 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 ALOX5APP20292 161 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 FAM166AQ6J272 317 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 LRRN1Q6UXK5 716 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 FAM57BQ71RH2 274 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 SPRYD4Q8WW59 207 aaPredicted RBP13.65□□□□□ -0.22
SATB1-217ENST00000493952 RAB1CQ92928 201 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 C1orf159Q96HA4 380 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 YIPF3Q9GZM5 350 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 TMEM100Q9NV29 134 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 USE1Q9NZ43 259 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 LAMP5Q9UJQ1 280 aa13.65□□□□□ -0.22
SATB1-217ENST00000493952 GGT3PA6NGU5 568 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 SLC22A31A6NKX4 558 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 PRR32B1ATL7 298 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 FAM157AC9JC47 383 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 TGFAP01135 160 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 APOC1P02654 83 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 CDH15P55291 814 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 LMO4P61968 165 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 SLC3A1Q07837 685 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.64□□□□□ -0.23
SATB1-217ENST00000493952 PQLC1Q8N2U9 271 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 CBR4Q8N4T8 237 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 RFLNBQ8N5W9 214 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 LINC01356Q8N9X3 169 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 SPSB4Q96A44 273 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 SGK3Q96BR1 496 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 TIMD4Q96H15 378 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 MEGF10Q96KG7 1140 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 SIGLEC11Q96RL6 698 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 CNN2Q99439 309 aaKnown RBP13.64□□□□□ -0.23
SATB1-217ENST00000493952 TTTY10Q9BZA0 68 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 SP140LQ9H930 580 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 ADGRL4Q9HBW9 690 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 GCM1Q9NP62 436 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 BRD7Q9NPI1 651 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 TMEM106BQ9NUM4 274 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 H2AFY2Q9P0M6 372 aaPredicted RBP13.64□□□□□ -0.23
SATB1-217ENST00000493952 ZNF319Q9P2F9 582 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 COPS3Q9UNS2 423 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 PPP1R3CQ9UQK1 317 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 LRP12Q9Y561 859 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 WNK2Q9Y3S1 2297 aa13.64□□□□□ -0.23
SATB1-217ENST00000493952 IGHV3-64DA0A0J9YX35 117 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 PSMD9O00233 223 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 LMX1BO60663 402 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 CA6P23280 308 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 SRP9P49458 86 aaKnown RBP13.63□□□□□ -0.23
SATB1-217ENST00000493952 MMP16P51512 607 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 ALDH3A2P51648 485 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 PSMA6P60900 246 aaKnown RBP13.63□□□□□ -0.23
SATB1-217ENST00000493952 FAM3AP98173 230 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 TIGD6Q17RP2 521 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 KRT77Q7Z794 578 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 GID4Q8IVV7 300 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 OR56B2PQ8NGI1 322 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
SATB1-217ENST00000493952 ZNF420Q8TAQ5 688 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms