RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 ACTR3BQ9P1U1 418 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 MIOXQ9UGB7 285 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 U3KQV3 271 aa12.25□□□□□ -0.45
ATG4B-223ENST00000493618 A0A1B0GWJ7 208 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 DNAJC9-AS1A6NH13 148 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 CLUP10909 449 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 SLC2A1P11166 492 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 COMPP49747 757 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-223ENST00000493618 PRKXP51817 358 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 PAX2Q02962 417 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF92Q03936 586 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 PAX8Q06710 450 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 CRMP1Q14194 572 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 TAF13Q15543 124 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 RASSF6Q6ZTQ3 369 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 C1orf87Q8N0U7 546 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 LNX2Q8N448 690 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 FITM2Q8N6M3 262 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 OR8B3Q8NGG8 313 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 OR8B2Q96RD0 313 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 COPS4Q9BT78 406 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 ADAT1Q9BUB4 502 aaKnown RBP12.24□□□□□ -0.45
ATG4B-223ENST00000493618 TRIM15Q9C019 465 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 NTN4Q9HB63 628 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 CENPMQ9NSP4 180 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 IL20Q9NYY1 176 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 KCNG2Q9UJ96 466 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 COMMD3-BMI1R4GMX3 469 aa12.24□□□□□ -0.45
ATG4B-223ENST00000493618 IGHV2-70DA0A0C4DH43 119 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 GGT3PA6NGU5 568 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 CD200P41217 278 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 MAGEA2P43356 314 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 PITPNBP48739 271 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 ENTPD1P49961 510 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 RAD23AP54725 363 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 BAMBIQ13145 260 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF181Q2M3W8 571 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 SPATS1Q496A3 300 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 AWAT1Q58HT5 328 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 BTNL3Q6UXE8 466 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 DOK3Q7L591 496 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 DHFR2Q86XF0 187 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 PARP8Q8N3A8 854 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 LINC00471Q8N535 108 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 OR11L1Q8NGX0 322 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 RAB40AQ8WXH6 277 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 TAF15Q92804 592 aaKnown RBP eCLIP12.23□□□□□ -0.45
ATG4B-223ENST00000493618 SLAMF6Q96DU3 332 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 NSL1Q96IY1 281 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 C1orf147Q96MC9 270 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-223ENST00000493618 MS4A7Q9GZW8 240 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-223ENST00000493618 MED20Q9H944 212 aa12.23□□□□□ -0.45
ATG4B-223ENST00000493618 SAMHD1Q9Y3Z3 626 aaKnown RBP12.23□□□□□ -0.45
ATG4B-223ENST00000493618 TRAV40A0A0B4J280 105 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 MDFIC2A0A1B0GVS7 189 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF593O00488 134 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-223ENST00000493618 SPI1P17947 270 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 FMO3P31513 532 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 GATA4P43694 442 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 MS4A2Q01362 244 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 MICAQ29983 383 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 SFRP4Q6FHJ7 346 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-223ENST00000493618 LCN8Q6JVE9 175 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 IQCF1Q8N6M8 205 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 OR6K6Q8NGW6 343 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 PLEKHA8Q96JA3 519 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 NUDT16L1Q9BRJ7 211 aaKnown RBP12.22□□□□□ -0.45
ATG4B-223ENST00000493618 MMADHCQ9H3L0 296 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-223ENST00000493618 REEP1Q9H902 201 aa12.22□□□□□ -0.45
ATG4B-223ENST00000493618 C3orf80F5H4A9 247 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 TBX1O43435 398 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 GRPP07492 148 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-223ENST00000493618 MNAT1P51948 309 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 EIF2B1Q14232 305 aaKnown RBP12.21□□□□□ -0.45
ATG4B-223ENST00000493618 TUSC1Q2TAM9 212 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 WDR25Q64LD2 544 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-223ENST00000493618 OR2T5Q6IEZ7 315 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 DRAM2Q6UX65 266 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 LRRN1Q6UXK5 716 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 DCDC5Q6ZRR9 648 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 ZNF826PQ6ZT77 177 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 NLRC3Q7RTR2 1065 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 CELF2-AS1Q8N7Q2 184 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 OR2T33Q8NG76 320 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 OR56B2PQ8NGI1 322 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 OR2T29Q8NH02 315 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 Q8TCH9 128 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 OTULINQ96BN8 352 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 CCT8L2Q96SF2 557 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 KCNJ15Q99712 375 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 NIPSNAP1Q9BPW8 284 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 NMNAT2Q9BZQ4 307 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 MAGIXQ9H6Y5 334 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 FN3KRPQ9HA64 309 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 C1orf123Q9NWV4 160 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
ATG4B-223ENST00000493618 CLN8Q9UBY8 286 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms