RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CLIC3O95833 236 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 LYNX1P0DP58 116 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 GABRB1P18505 474 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 TNFSF4P23510 183 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 TNFAIP6P98066 277 aaPredicted RBP11.9□□□□□ -0.5
CCM2-217ENST00000492883 EGR3Q06889 387 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 CDK5R2Q13319 367 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 FAM209AQ5JX71 171 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 ZNF786Q8N393 782 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 OR8G5Q8NG78 346 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 OR2Z1Q8NG97 314 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 OR13G1Q8NGZ3 307 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 C10orf105Q8TEF2 133 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 RDH5Q92781 318 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 SGK3Q96BR1 496 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 REPIN1Q9BWE0 567 aaKnown RBP11.9□□□□□ -0.5
CCM2-217ENST00000492883 REG4Q9BYZ8 158 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 OPA3Q9H6K4 179 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 AMBNQ9NP70 447 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 POLQO75417 2590 aa11.9□□□□□ -0.5
CCM2-217ENST00000492883 NAV2Q8IVL1 2488 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 ROS1P08922 2347 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 HEATR1Q9H583 2144 aaKnown RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 CD300LBA8K4G0 201 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 NDUFS8O00217 210 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 MAGEB4O15481 346 aaPredicted RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 CDC14BO60729 498 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 KRT8P05787 483 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 ANOS1P23352 680 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 CFL1P23528 166 aaKnown RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 COL8A2P25067 703 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 DCTDP32321 178 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 PSMA6P60900 246 aaKnown RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 ADARB1P78563 741 aaKnown RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 ZNF829Q3KNS6 432 aaPredicted RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 ZNF691Q5VV52 312 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 PRSS45Q7RTY3 260 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 RFLNBQ8N5W9 214 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 ZNF540Q8NDQ6 660 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 SETD9Q8NE22 299 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 ELMOD3Q96FG2 381 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 REEP6Q96HR9 211 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 C18orf12Q96KH6 178 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 PIMREGQ9BSJ6 248 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 ADI1Q9BV57 179 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 SAP30LQ9HAJ7 183 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 TMEM100Q9NV29 134 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 RPL36Q9Y3U8 105 aaKnown RBP11.89□□□□□ -0.51
CCM2-217ENST00000492883 PCDHGB1Q9Y5G3 927 aa11.89□□□□□ -0.51
CCM2-217ENST00000492883 AKAP6Q13023 2319 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 DAPL1A0PJW8 107 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 ACOD1A6NK06 481 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 PRR32B1ATL7 298 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 H0YAE9 185 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 NCR1O76036 304 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 ADH4P08319 380 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 DBTP11182 482 aaKnown RBP11.88□□□□□ -0.51
CCM2-217ENST00000492883 SLC25A16P16260 332 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 CAPGP40121 348 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 MRPS11P82912 194 aaKnown RBP11.88□□□□□ -0.51
CCM2-217ENST00000492883 ZNF91Q05481 1191 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 IL18R1Q13478 541 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 Q6ZR03 302 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 SSX6Q7RTT6 188 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 YIPF7Q8N8F6 280 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 NRG4Q8WWG1 115 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 SPSB4Q96A44 273 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 SLC30A2Q9BRI3 323 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 VCX3BQ9H321 246 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 RGCCQ9H4X1 137 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 MRM2Q9UI43 246 aaKnown RBP11.88□□□□□ -0.51
CCM2-217ENST00000492883 GTF2A1LQ9UNN4 478 aa11.88□□□□□ -0.51
CCM2-217ENST00000492883 PRRC2AP48634 2157 aaKnown RBP11.88□□□□□ -0.51
CCM2-217ENST00000492883 IGHV1-69-2A0A0G2JMI3 117 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 METTL15A6NJ78 407 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 LOC110117498-PIK3R3F6TDL0 507 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 LILRA1O75019 489 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 RPP14O95059 124 aaKnown RBP11.87□□□□□ -0.51
CCM2-217ENST00000492883 CD55P08174 381 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 INHBBP09529 407 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 FOSL1P15407 271 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 ACHEP22303 614 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 DDOSTP39656 456 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 CRYBB2P43320 205 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 MMP16P51512 607 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 ACTC1P68032 377 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 ACTA1P68133 377 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 FAM3AP98173 230 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 HFEQ30201 348 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 PLEKHG7Q6ZR37 379 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 C8orf59Q8N0T1 100 aaPredicted RBP11.87□□□□□ -0.51
CCM2-217ENST00000492883 ACBD7Q8N6N7 88 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 MAPK1IP1LQ8NDC0 245 aa11.87□□□□□ -0.51
CCM2-217ENST00000492883 OR10AD1Q8NGE0 317 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms