RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 CSF3P09919 207 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 ZNF81P51508 661 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 MMP15P51511 669 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 DSCR9P59020 149 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 ISL1P61371 349 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 RAB40BQ12829 278 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 GK2Q14410 553 aaPredicted RBP14.3□□□□□ -0.12
CCDC13-208ENST00000492806 ZNF829Q3KNS6 432 aaPredicted RBP14.3□□□□□ -0.12
CCDC13-208ENST00000492806 SNAI3Q3KNW1 292 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 FAM209AQ5JX71 171 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 Q5PR19 223 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 PLEKHG7Q6ZR37 379 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 USP51Q70EK9 711 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 PGAP1Q75T13 922 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 ACBD7Q8N6N7 88 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 SPSB4Q96A44 273 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 PGAM5Q96HS1 289 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 REPIN1Q9BWE0 567 aaKnown RBP14.3□□□□□ -0.12
CCDC13-208ENST00000492806 OR10A2Q9H208 303 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 AASSQ9UDR5 926 aa14.3□□□□□ -0.12
CCDC13-208ENST00000492806 A0A1W2PQL4 384 aaPredicted RBP14.29□□□□□ -0.12
CCDC13-208ENST00000492806 NDUFS7O75251 213 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 DDOSTP39656 456 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 MMP16P51512 607 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 AQP4P55087 323 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 FAM57BQ71RH2 274 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 KCTD20Q7Z5Y7 419 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 KRTAP1-3Q8IUG1 177 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 LGALS12Q96DT0 336 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 TBX5Q99593 518 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 MOB1AQ9H8S9 216 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 INPP5EQ9NRR6 644 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 ZDHHC8Q9ULC8 765 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 NOP16Q9Y3C1 178 aaKnown RBP14.29□□□□□ -0.12
CCDC13-208ENST00000492806 ITPR3Q14573 2671 aa14.29□□□□□ -0.12
CCDC13-208ENST00000492806 METTL15A6NJ78 407 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 PRR32B1ATL7 298 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 TBX1O43435 398 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 APOL3O95236 402 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 SLC2A1P11166 492 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 VHLP40337 213 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 ZNF92Q03936 586 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 CDK5R2Q13319 367 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 HLXQ14774 488 aaPredicted RBP14.28□□□□□ -0.12
CCDC13-208ENST00000492806 SNCBQ16143 134 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 TIGD6Q17RP2 521 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 TMEM255AQ5JRV8 349 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 GLYATL3Q5SZD4 288 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 ZNF684Q5T5D7 378 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 OR2T2Q6IF00 324 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 THAP5Q7Z6K1 395 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 RFLNBQ8N5W9 214 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 OR8G5Q8NG78 346 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 FBLIM1Q8WUP2 373 aa14.28□□□□□ -0.12
CCDC13-208ENST00000492806 MRM2Q9UI43 246 aaKnown RBP14.28□□□□□ -0.12
CCDC13-208ENST00000492806 MAP1AP78559 2803 aaPredicted RBP14.27□□□□□ -0.12
CCDC13-208ENST00000492806 A0A0U1RQV5 110 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 TMEM269A0A1B0GVZ9 245 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 DAPL1A0PJW8 107 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 PSMD9O00233 223 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 SSX4O60224 188 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 IGHA1P01876 353 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 CD55P08174 381 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 GNAO1P09471 354 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 TACSTD2P09758 323 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 NAT2P11245 290 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 TNFSF4P23510 183 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 ACTA2P62736 377 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 ACTG2P63267 376 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 MRPS11P82912 194 aaKnown RBP14.27□□□□□ -0.13
CCDC13-208ENST00000492806 ZNF85Q03923 595 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 ALKBH6Q3KRA9 238 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 CLEC2AQ6UVW9 174 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 DNM1P46Q6ZS02 220 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 SSX6Q7RTT6 188 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 FAM220AQ7Z4H9 259 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 ZCCHC24Q8N2G6 241 aaKnown RBP14.27□□□□□ -0.13
CCDC13-208ENST00000492806 YIPF7Q8N8F6 280 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 OR13G1Q8NGZ3 307 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 CNIH3Q8TBE1 160 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 REEP6Q96HR9 211 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 JAM3Q9BX67 310 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 TTTY10Q9BZA0 68 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 SLC22A4Q9H015 551 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 TPK1Q9H3S4 243 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 AMBNQ9NP70 447 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 FGF20Q9NP95 211 aaPredicted RBP14.27□□□□□ -0.13
CCDC13-208ENST00000492806 BRD7Q9NPI1 651 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 FAM206AQ9NX38 181 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 NUFIP1Q9UHK0 495 aaKnown RBP14.27□□□□□ -0.13
CCDC13-208ENST00000492806 N6AMT1Q9Y5N5 214 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 R4GMQ9 66 aa14.27□□□□□ -0.13
CCDC13-208ENST00000492806 A0A1B0GWJ7 208 aa14.26□□□□□ -0.13
CCDC13-208ENST00000492806 GGT3PA6NGU5 568 aa14.26□□□□□ -0.13
CCDC13-208ENST00000492806 ZSCAN5BA6NJL1 495 aa14.26□□□□□ -0.13
CCDC13-208ENST00000492806 CD300LBA8K4G0 201 aa14.26□□□□□ -0.13
CCDC13-208ENST00000492806 LOC110117498-PIK3R3F6TDL0 507 aa14.26□□□□□ -0.13
CCDC13-208ENST00000492806 NDUFS8O00217 210 aa14.26□□□□□ -0.13
CCDC13-208ENST00000492806 SRSF10O75494 262 aaKnown RBP14.26□□□□□ -0.13
CCDC13-208ENST00000492806 DCKP27707 260 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms