RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 COMMD3-BMI1R4GMX3 469 aa7.42□□□□□ -1.22
HDAC3-211ENST00000491581 DOCK11Q5JSL3 2073 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 PPIAL4EA0A075B759 164 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 A0A0A6YYJ9 748 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 IGHV2-70DA0A0C4DH43 119 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 A8MXK9 166 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 PPIAL4DF5H284 164 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 M0R135 149 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 TNFRSF11BO00300 401 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 ARPC3O15145 178 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 GYPAP02724 150 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 GRPP07492 148 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 PPIAL4FP0DN26 164 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 SELLP14151 372 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 MDKP21741 143 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-211ENST00000491581 CRABP1P29762 137 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 COMPP49747 757 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-211ENST00000491581 GMFBP60983 142 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 FGF12P61328 243 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 GNB2P62879 340 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 CSNK2BP67870 215 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 MXRA7P84157 204 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 SLC3A1Q07837 685 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 BAMBIQ13145 260 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 SLC9A3R2Q15599 337 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 DEFB112Q30KQ8 113 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 USP43Q70EL4 1123 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 DOK3Q7L591 496 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 PIGWQ7Z7B1 504 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 SPICQ8N5J4 248 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 PROKR2Q8NFJ6 384 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 ZDHHC16Q969W1 377 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 ZNF799Q96GE5 643 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 ADAT1Q9BUB4 502 aaKnown RBP7.41□□□□□ -1.22
HDAC3-211ENST00000491581 TSSK6Q9BXA6 273 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 FGF23Q9GZV9 251 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-211ENST00000491581 SEMA6AQ9H2E6 1030 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 MARCH7Q9H992 704 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 BRD7Q9NPI1 651 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 DDX28Q9NUL7 540 aaKnown RBP7.41□□□□□ -1.22
HDAC3-211ENST00000491581 TBC1D23Q9NUY8 699 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 DNAJC27Q9NZQ0 273 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 OR5V1Q9UGF6 321 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 KLHDC2Q9Y2U9 406 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 CDH10Q9Y6N8 788 aa7.41□□□□□ -1.22
HDAC3-211ENST00000491581 A0A1B0GWJ7 208 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 CD300LBA8K4G0 201 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 B2RBV5 119 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 TMPRSS2O15393 492 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 HOXA3O43365 443 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 SPRY1O43609 319 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 T-ENOLP0DO92 83 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 SPI1P17947 270 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 PITPNBP48739 271 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 SRP9P49458 86 aaKnown RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 HCCSP53701 268 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 KRTAP10-3P60369 221 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 OR8G1Q15617 311 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 GFOD2Q3B7J2 385 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 KLHL12Q53G59 568 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 SAMD4BQ5PRF9 694 aaKnown RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 LINC01590Q5TEZ4 76 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 WDR25Q64LD2 544 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 DNM1P34Q6PK57 102 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 PGAP1Q75T13 922 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 MRPL21Q7Z2W9 205 aaKnown RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 C11orf53Q8IXP5 236 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 OR56B2PQ8NGI1 322 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 OR6K6Q8NGW6 343 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 OR2AJ1Q8NGZ0 328 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 SPRYD4Q8WW59 207 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 RAB40AQ8WXH6 277 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 POP5Q969H6 163 aaKnown RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 MCUR1Q96AQ8 359 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 OTULINQ96BN8 352 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 SLAMF6Q96DU3 332 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 NEIL1Q96FI4 390 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 TECTBQ96PL2 329 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 NUDT16L1Q9BRJ7 211 aaKnown RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 PCGF1Q9BSM1 259 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 MRI1Q9BV20 369 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 RBM4Q9BWF3 364 aaKnown RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 TTTY10Q9BZA0 68 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 MS4A7Q9GZW8 240 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 MMADHCQ9H3L0 296 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 C1orf123Q9NWV4 160 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 KCNG2Q9UJ96 466 aa7.4□□□□□ -1.22
HDAC3-211ENST00000491581 POLR3KQ9Y2Y1 108 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-211ENST00000491581 A0A1W2PRD5 423 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 A0A1W2PRF3 423 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 A0A1W2PRM7 423 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 GGT3PA6NGU5 568 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 PSMD9O00233 223 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 ZNF593O00488 134 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-211ENST00000491581 SURF4O15260 269 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 TBX1O43435 398 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 SELENOFO60613 162 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 GMNNO75496 209 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 PLATP00750 562 aa7.39□□□□□ -1.23
HDAC3-211ENST00000491581 HKR1P10072 659 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms