RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 LCP2Q13094 533 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 RCAN2Q14206 197 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 CEBPEQ15744 281 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 NNATQ16517 81 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 CCDC92Q53HC0 331 aaPredicted RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 PAN3Q58A45 887 aaKnown RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 TCHHL1Q5QJ38 904 aaPredicted RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 ZNF678Q5SXM1 525 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 LGSNQ5TDP6 509 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 OR5M10Q6IEU7 315 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 FAM71E1Q6IPT2 247 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 C8orf74Q6P047 294 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 SCIMPQ6UWF3 145 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 ENPP6Q6UWR7 440 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 EGFL6Q8IUX8 553 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 TIGD4Q8IY51 512 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 H1FOOQ8IZA3 346 aaPredicted RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 OR2L13Q8N349 312 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 GPR137CQ8N3F9 429 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 FADS6Q8N9I5 356 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 WFDC11Q8NEX6 87 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 OR7G2Q8NG99 324 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 OR9A2Q8NGT5 310 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 C8orf46Q8TAG6 207 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 RDH11Q8TC12 318 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 C16orf78Q8WTQ4 265 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 IFT81Q8WYA0 676 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 RMND5BQ96G75 393 aaPredicted RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 C16orf74Q96GX8 76 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 ZFP3Q96NJ6 502 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 WFIKKN1Q96NZ8 548 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 INTS14Q96SY0 518 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 HBEGFQ99075 208 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 OSBPL11Q9BXB4 747 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 SHCBP1LQ9BZQ2 653 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 STMN4Q9H169 189 aaPredicted RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 CDC42EP4Q9H3Q1 356 aaKnown RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 DSN1Q9H410 356 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 ANKRA2Q9H9E1 313 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 FOLH1BQ9HBA9 442 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 S100A14Q9HCY8 104 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 MED11Q9P086 117 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 TMEM216Q9P0N5 145 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 CLCF1Q9UBD9 225 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 BCAP29Q9UHQ4 241 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 ZNF337Q9Y3M9 751 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 ZNF175Q9Y473 711 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 TIMM22Q9Y584 194 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 ZNF780BQ9Y6R6 833 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 CELSR2Q9HCU4 2923 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 LRBAP50851 2863 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 HIVEP2P31629 2446 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 SHROOM3Q8TF72 1996 aa2.27□□□□□ -2.05
PHC3-213ENST00000491258 UTP20O75691 2785 aaKnown RBP2.27□□□□□ -2.05
PHC3-213ENST00000491258 HIVEP1P15822 2718 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 EXOC1LA0A1B0GW35 172 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 GNG14A0A1W2PPG7 69 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 SLC22A20A6NK97 555 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 CASKO14936 926 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 RIPK2O43353 540 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 EMC8O43402 210 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 PLIN3O60664 434 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 AQP8O94778 261 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 SUPT7LO94864 414 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 IGKV1D-16P01601 117 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 GSTA1P08263 222 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 IFI6P09912 130 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 LOXP28300 417 aaPredicted RBP2.26□□□□□ -2.05
PHC3-213ENST00000491258 IL12BP29460 328 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 TIA1P31483 386 aaKnown RBP eCLIP2.26□□□□□ -2.05
PHC3-213ENST00000491258 EVI2BP34910 448 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 UGT2B10P36537 528 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 CD79BP40259 229 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 MAP3K8P41279 467 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 SLC6A8P48029 635 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 NPBWR1P48145 328 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 NCBP2P52298 156 aaKnown RBP eCLIP2.26□□□□□ -2.053e-8■■■■□ 24.3
PHC3-213ENST00000491258 SUCLG1P53597 346 aaKnown RBP2.26□□□□□ -2.05
PHC3-213ENST00000491258 DIO3P55073 304 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 FOXA1P55317 472 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 PKNOX1P55347 436 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 DSCR4P56555 118 aaPredicted RBP2.26□□□□□ -2.05
PHC3-213ENST00000491258 DNAJB13P59910 316 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 MRPS22P82650 360 aaKnown RBP2.26□□□□□ -2.05
PHC3-213ENST00000491258 C2orf80Q0P641 193 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 GPR50Q13585 617 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 HEPACAMQ14CZ8 416 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 GUSBP1Q15486 140 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 GLYR1Q49A26 553 aaPredicted RBP2.26□□□□□ -2.05
PHC3-213ENST00000491258 SPIN4Q56A73 249 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 HSP90B2PQ58FF3 399 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 CPTPQ5TA50 214 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 OTPQ5XKR4 325 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 NOXRED1Q6NXP6 359 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 APOOLQ6UXV4 268 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 ZYG11AQ6WRX3 759 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 TRMT10CQ7L0Y3 403 aaKnown RBP2.26□□□□□ -2.05
PHC3-213ENST00000491258 SPATA19Q7Z5L4 167 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 LUZP2Q86TE4 346 aa2.26□□□□□ -2.05
PHC3-213ENST00000491258 BIVMQ86UB2 503 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms