RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 OR52D1Q9H346 318 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 RPRD1BQ9NQG5 326 aaKnown RBP12.86□□□□□ -0.35
COL2A1-207ENST00000490609 ADA2Q9NZK5 511 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 POLR1DQ9Y2S0 133 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 A0A1B0GW55 424 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 CD300LBA8K4G0 201 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
COL2A1-207ENST00000490609 LCATP04180 440 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 BPIFB3P59826 476 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 GLYATQ6IB77 296 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 PGM2L1Q6PCE3 622 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4L9Q6RFH8 374 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-207ENST00000490609 CYP4Z1Q86W10 505 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 GCSAMQ8N6F7 178 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 OR2AE1Q8NHA4 323 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 ZDHHC16Q969W1 377 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 FAM162AQ96A26 154 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 WDFY2Q96P53 400 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 PITX2Q99697 317 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 HCAR1Q9BXC0 346 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 CCDC134Q9H6E4 229 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 RNF7Q9UBF6 113 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 DUX4Q9UBX2 424 aa12.85□□□□□ -0.35
COL2A1-207ENST00000490609 A0A1B0GUS0 222 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 LGALS8O00214 317 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 P2RY10O00398 339 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 PLXNB1O43157 2135 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 TOX4O94842 621 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 KNG1P01042 644 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 GSSP48637 474 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 NPY4RP50391 375 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 PSME3P61289 254 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 POU4F2Q12837 409 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 ECH1Q13011 328 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 PGAP1Q75T13 922 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 FAM90A1Q86YD7 464 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 SDR9C7Q8NEX9 313 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 OR4F5Q8NH21 305 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 LINC01006Q8NI28 216 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 KCTD14Q9BQ13 255 aaPredicted RBP12.84□□□□□ -0.35
COL2A1-207ENST00000490609 PPP1R3EQ9H7J1 279 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 EFCAB1Q9HAE3 211 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 BEX1Q9HBH7 125 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 ZNF446Q9NWS9 450 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 AURKCQ9UQB9 309 aa12.84□□□□□ -0.35
COL2A1-207ENST00000490609 A0A0U1RQK1 487 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 PYCR1P32322 319 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 IER3P46695 156 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 PROK1P58294 105 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 OR8G1Q15617 311 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 GLYATL3Q5SZD4 288 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 DNM1P34Q6PK57 102 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 OR11L1Q8NGX0 322 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 FANK1Q8TC84 345 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 FAM71F1Q96KD3 344 aaPredicted RBP12.83□□□□□ -0.36
COL2A1-207ENST00000490609 NDEL1Q9GZM8 345 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 MYLK2Q9H1R3 596 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 POMT1Q9Y6A1 747 aa12.83□□□□□ -0.36
COL2A1-207ENST00000490609 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 IGHV1-69DA0A0B4J2H0 117 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.82□□□□□ -0.36
COL2A1-207ENST00000490609 M0R135 149 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 ADAM20O43506 726 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 GMDSO60547 372 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 CLPXO76031 633 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 IGHV1-69P01742 117 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 GYPAP02724 150 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 AMY2BP19961 511 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 SLC6A6P31641 620 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 NUDT2P50583 147 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 ARF6P62330 175 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 SLC35F1Q5T1Q4 408 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 TEX36Q5VZQ5 186 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 ZNF620Q6ZNG0 422 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 RNF148Q8N7C7 305 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 BOLLQ8N9W6 283 aaKnown RBP12.82□□□□□ -0.36
COL2A1-207ENST00000490609 PLPP7Q8NBV4 271 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 SPRYD4Q8WW59 207 aaPredicted RBP12.82□□□□□ -0.36
COL2A1-207ENST00000490609 ZNF799Q96GE5 643 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 TECTBQ96PL2 329 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 RBM4BQ9BQ04 359 aaKnown RBP12.82□□□□□ -0.36
COL2A1-207ENST00000490609 IFT27Q9BW83 186 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 MMADHCQ9H3L0 296 aaPredicted RBP12.82□□□□□ -0.36
COL2A1-207ENST00000490609 EGLN3Q9H6Z9 239 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 GORASP2Q9H8Y8 452 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 FN3KRPQ9HA64 309 aa12.82□□□□□ -0.36
COL2A1-207ENST00000490609 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms