RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 NMNAT2Q9BZQ4 307 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 VNN3Q9NY84 501 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ACTR3BQ9P1U1 418 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 KIR2DS1A0A191URI9 304 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 LRRC30A6NM36 301 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CD300LBA8K4G0 201 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TNFRSF11BO00300 401 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TNFRSF13BO14836 293 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 FAM20BO75063 409 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PTBP3O95758 552 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CA6P23280 308 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 GNB2P62879 340 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 MALLQ13021 153 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 RPL13AP3Q6NVV1 102 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 C16orf89Q6UX73 402 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 C1orf87Q8N0U7 546 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 LNX2Q8N448 690 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PROKR2Q8NFJ6 384 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR4Q3Q8NH05 313 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR2AE1Q8NHA4 323 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ERGIC1Q969X5 290 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 COMMD3-BMI1R4GMX3 469 aa16.18■□□□□ 0.18
TNFRSF1B-202ENST00000489921 IGHV3OR16-10A0A075B7F0 116 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ZNF823P16415 610 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PSMB10P40306 273 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 GNGT1P63211 74 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 GLYATL3Q5SZD4 288 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 LRRN1Q6UXK5 716 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PARP8Q8N3A8 854 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 FITM2Q8N6M3 262 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ZNF511Q8NB15 262 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR52L1Q8NGH7 329 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR9Q1Q8NGQ5 310 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR2T4Q8NH00 348 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 UFSP2Q9NUQ7 469 aa16.17■□□□□ 0.18
TNFRSF1B-202ENST00000489921 GYPBP06028 91 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CLUP10909 449 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PITPNBP48739 271 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 MS4A2Q01362 244 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 BAMBIQ13145 260 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CRMP1Q14194 572 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 SLC9A3R2Q15599 337 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TEX30Q5JUR7 227 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 WDR25Q64LD2 544 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 DRAM2Q6UX65 266 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 RBMS3Q6XE24 437 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 DCDC5Q6ZRR9 648 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 MRPL21Q7Z2W9 205 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 DCXRQ7Z4W1 244 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 LINC00471Q8N535 108 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR8B3Q8NGG8 313 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 SPRYD4Q8WW59 207 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 SPTSSAQ969W0 71 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ZMYND19Q96E35 227 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PLEKHA8Q96JA3 519 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR8B2Q96RD0 313 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 NDE1Q9NXR1 346 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CTSZQ9UBR2 303 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PCDHGB1Q9Y5G3 927 aa16.16■□□□□ 0.18
TNFRSF1B-202ENST00000489921 C22orf46C9J442 243 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 FCN3O75636 299 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 DCTN3O75935 186 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CCNB2O95067 398 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 RNASE1P07998 156 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR8G1Q15617 311 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 BTNL3Q6UXE8 466 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 AQP11Q8NBQ7 271 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 SGMS2Q8NHU3 365 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TAF15Q92804 592 aaKnown RBP eCLIP16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 SLAMF6Q96DU3 332 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 NUDT16L1Q9BRJ7 211 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ZNF747Q9BV97 191 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TSSK6Q9BXA6 273 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 MS4A7Q9GZW8 240 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CLN8Q9UBY8 286 aa16.15■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CLDN34H7C241 214 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 ZNF593O00488 134 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 PHYHO14832 338 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 SPRY1O43609 319 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 GMDSO60547 372 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 SPI1P17947 270 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 ENTPD1P49961 510 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 PRKXP51817 358 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 SLC25A1P53007 311 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 MXRA7P84157 204 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 FOXL1Q12952 345 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 MICAQ29983 383 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 LINC01590Q5TEZ4 76 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 LCN8Q6JVE9 175 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 KCNJ15Q99712 375 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 ADAT1Q9BUB4 502 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 DGCR6LQ9BY27 220 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 SLC22A4Q9H015 551 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 PRDM13Q9H4Q3 707 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 TBC1D23Q9NUY8 699 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 ARMC1Q9NVT9 282 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 MRPL15Q9P015 296 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 RNF7Q9UBF6 113 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 CMYA5Q8N3K9 4069 aa16.14■□□□□ 0.17
TNFRSF1B-202ENST00000489921 TRAV40A0A0B4J280 105 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms