RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ALX1Q15699 326 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ATP6V1FQ16864 119 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 QRICH1Q2TAL8 776 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 KIAA1644Q3SXP7 199 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PAN3Q58A45 887 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 REP15Q6BDI9 236 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RFWD3Q6PCD5 774 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 Q6ZSR9 355 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 Q6ZVH6 145 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 NOTCH2NLQ7Z3S9 236 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CEACAM19Q7Z692 300 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CRLF3Q8IUI8 442 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SVOPLQ8N434 492 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 STPG4Q8N801 248 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 OR52B6Q8NGF0 335 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 OR6N2Q8NGY6 317 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 OR2G2Q8NGZ5 317 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SPPL2AQ8TCT8 520 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PYROXD1Q8WU10 500 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MED8Q96G25 268 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ITCHQ96J02 903 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF681Q96N22 645 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RANBP9Q96S59 729 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GABRG3Q99928 467 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CLEC7AQ9BXN2 247 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SLC40A1Q9NP59 571 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SPHK2Q9NRA0 654 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CTPS2Q9NRF8 586 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 IL37Q9NZH6 218 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PRODH2Q9UF12 536 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ASIC3Q9UHC3 531 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MUTYHQ9UIF7 546 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ATPIF1Q9UII2 106 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 FADS3Q9Y5Q0 445 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MRPS18BQ9Y676 258 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 LAMB1P07942 1786 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MAST2Q6P0Q8 1798 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SZT2Q5T011 3432 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ABCB11O95342 1321 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ROBO3Q96MS0 1386 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 IGKV1D-13A0A0B4J2D9 117 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CCL15-CCL14A0A0B4J2E2 113 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 IGKV3D-20A0A0C4DH25 116 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF816-ZNF321PA0A0X1KG74 233 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RBMY1BA6NDE4 496 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RBMY1EA6NEQ0 496 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GOLGA8JA6NMD2 632 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 C15orf61A6NNL5 157 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GOLGA8KD6RF30 607 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CLDN34H7C241 214 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 K7ENP7 123 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CDX4O14627 284 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 LIN7AO14910 233 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ATP8B1O43520 1251 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SULT1B1O43704 296 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 SHOX2O60902 331 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF189O75820 626 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 EIF3GO75821 320 aaKnown RBP eCLIP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CEACAM4O75871 244 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MPZL1O95297 269 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 AHSA1O95433 338 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RAB3DO95716 219 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CTXN2P0C2S0 81 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RBMY1DP0C7P1 496 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GOLGA8HP0CJ92 632 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RBMY1A1P0DJD3 496 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 IGKV1-13P0DP09 117 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CMA1P23946 247 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CHRNB4P30926 498 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 KIR2DS4P43632 304 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 TFPI2P48307 235 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 AQP5P55064 265 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CLDN12P56749 244 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 VBP1P61758 197 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 GNB1P62873 340 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 RPL31P62899 125 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 IRX1P78414 480 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PITPNAQ00169 270 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ACVR1Q04771 509 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CYP24A1Q07973 514 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PUDPQ08623 228 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 KIAA0141Q14154 515 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 FASTKQ14296 549 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 KCNJ11Q14654 390 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 CCL15Q16663 113 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 DCST2Q5T1A1 773 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZC2HC1BQ5TFG8 222 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF658Q5TYW1 1059 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 DUPD1Q68J44 220 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 Q6ZT83 130 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PDIK1LQ8N165 341 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF557Q8N988 423 aaPredicted RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MAPK15Q8TD08 544 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 MRPS31Q92665 395 aaKnown RBP2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 EEF1AKMT3Q96AZ1 226 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 PPP1R14BQ96C90 147 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ATXN7L3BQ96GX2 97 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ADTRPQ96IZ2 230 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 TIMM29Q9BSF4 260 aa2.5□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF426Q9BUY5 554 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms