RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 RFX4Q33E94 735 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 DNAL1Q4LDG9 190 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 PRAMEF6Q5VXH4 476 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 DNM1P34Q6PK57 102 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 BRD3OSQ6XYD6 125 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 GJC3Q8NFK1 279 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 Q8TCH9 128 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 GNPDA2Q8TDQ7 276 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 CCDC124Q96CT7 223 aaKnown RBP9.78□□□□□ -0.84
ACTN4-206ENST00000489451 NEIL1Q96FI4 390 aaPredicted RBP9.78□□□□□ -0.84
ACTN4-206ENST00000489451 ZNF582Q96NG8 517 aaPredicted RBP9.78□□□□□ -0.84
ACTN4-206ENST00000489451 ERMAPQ96PL5 475 aaPredicted RBP9.78□□□□□ -0.84
ACTN4-206ENST00000489451 NMNAT3Q96T66 252 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 THTPAQ9BU02 230 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 IFT27Q9BW83 186 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 FN3KQ9H479 309 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 MRPL22Q9NWU5 206 aaKnown RBP9.78□□□□□ -0.84
ACTN4-206ENST00000489451 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 RYR3Q15413 4870 aa9.78□□□□□ -0.84
ACTN4-206ENST00000489451 OR6C68A6NDL8 312 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 IFNL4K9M1U5 179 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 TNFRSF13BO14836 293 aaPredicted RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 HOXA3O43365 443 aaPredicted RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 IDH3BO43837 385 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 FAM20BO75063 409 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 CCNB2O95067 398 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 HIST1H1CP16403 213 aaKnown RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 ATP6V1B2P21281 511 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 CPT2P23786 658 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 CD200P41217 278 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 PITPNBP48739 271 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 SRP9P49458 86 aaKnown RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 IL13RA1P78552 427 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 TRAP1Q12931 704 aaKnown RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 TSPAN31Q12999 210 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 SNAI3Q3KNW1 292 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 WDR25Q64LD2 544 aaPredicted RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 RUSC1-AS1Q66K80 236 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 RPL13AP3Q6NVV1 102 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 LRRN1Q6UXK5 716 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 ZBTB46Q86UZ6 589 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 OR52L1Q8NGH7 329 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 OR5L1Q8NGL2 311 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 ZNRF4Q8WWF5 429 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 SLC25A28Q96A46 364 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 MAP6Q96JE9 813 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 NUDT16L1Q9BRJ7 211 aaKnown RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 OR52D1Q9H346 318 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 REEP1Q9H902 201 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 SMURF1Q9HCE7 757 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 SRA1Q9HD15 236 aaKnown RBP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.77□□□□□ -0.85
ACTN4-206ENST00000489451 CYB5R1Q9UHQ9 305 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 POLR1DQ9Y2S0 133 aa9.77□□□□□ -0.85
ACTN4-206ENST00000489451 F5H5K5 113 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 ARPC3O15145 178 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 PTBP3O95758 552 aaKnown RBP9.76□□□□□ -0.85
ACTN4-206ENST00000489451 RENP00797 406 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 SFTPBP07988 381 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 RAP2AP10114 183 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 MMP9P14780 707 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 RPS27P42677 84 aaKnown RBP9.76□□□□□ -0.85
ACTN4-206ENST00000489451 MAGEA2P43356 314 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 CENPAP49450 140 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 RASSF2P50749 326 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 KRTAP10-3P60369 221 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 FGF12P61328 243 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 MS4A2Q01362 244 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 GK3PQ14409 553 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 OR2T5Q6IEZ7 315 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 PGM2L1Q6PCE3 622 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 C16orf87Q6PH81 154 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 LYPD4Q6UWN0 246 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 BTNL3Q6UXE8 466 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 DCDC5Q6ZRR9 648 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 SDR9C7Q8NEX9 313 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 OR8B3Q8NGG8 313 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 OR2T29Q8NH02 315 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 OR4K13Q8NH42 304 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 TMIGD2Q96BF3 282 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 OR8B2Q96RD0 313 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 TBX15Q96SF7 602 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 DDOQ99489 341 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 ATF6BQ99941 703 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 SLITRK2Q9H156 845 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 RPRD1BQ9NQG5 326 aaKnown RBP9.76□□□□□ -0.85
ACTN4-206ENST00000489451 UFSP2Q9NUQ7 469 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 TMEM100Q9NV29 134 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 SAMHD1Q9Y3Z3 626 aaKnown RBP9.76□□□□□ -0.85
ACTN4-206ENST00000489451 LYVE1Q9Y5Y7 322 aa9.76□□□□□ -0.85
ACTN4-206ENST00000489451 TCRBV5S2A0A599 114 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 FAM181BA6NEQ2 426 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 AQP12BA6NM10 295 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 POM121CA8CG34 1229 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 SRRM5B3KS81 715 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 GNGT2O14610 69 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 PHYHO14832 338 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 OTX1P32242 354 aaPredicted RBP9.75□□□□□ -0.85
ACTN4-206ENST00000489451 MTNR1AP48039 350 aa9.75□□□□□ -0.85
ACTN4-206ENST00000489451 GSSP48637 474 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms