RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 LRCH1Q9Y2L9 728 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 INSIG2Q9Y5U4 225 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 C5orf63A6NC05 138 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 RIIAD1A6NNX1 92 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF593O00488 134 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-213ENST00000489045 ACOT8O14734 319 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 WNT2P09544 360 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 RPS2P15880 293 aaKnown RBP19.28■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF12P17014 697 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 CD200P41217 278 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 GATA4P43694 442 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 PRKXP51817 358 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF154Q13106 437 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 FAM201AQ5SY85 155 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 GLYATL3Q5SZD4 288 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 PRAMEF6Q5VXH4 476 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 ADGRG5Q8IZF4 528 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 C1orf87Q8N0U7 546 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 BPIFB2Q8N4F0 458 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 CELF2-AS1Q8N7Q2 184 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 TEX47Q8TBZ9 253 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 THTPAQ9BU02 230 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 CENPMQ9NSP4 180 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 OR5V1Q9UGF6 321 aa19.28■□□□□ 0.68
COL9A3-213ENST00000489045 CD300LBA8K4G0 201 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 CST1P01037 141 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF3P17036 446 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 CA6P23280 308 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 GK3PQ14409 553 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 TAF13Q15543 124 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 OR8G1Q15617 311 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 ARMCX4Q5H9R4 360 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 TEX30Q5JUR7 227 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 CD300LDQ6UXZ3 194 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 KLBQ86Z14 1044 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 IQCF1Q8N6M8 205 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 GIPC3Q8TF64 312 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 C22orf15Q8WYQ4 148 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 JMJD8Q96S16 334 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 FEVQ99581 238 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 TMEM246Q9BRR3 403 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 CHID1Q9BWS9 393 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 CMC2Q9NRP2 79 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 AUP1Q9Y679 476 aa19.27■□□□□ 0.68
COL9A3-213ENST00000489045 GGT3PA6NGU5 568 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 ZNF878C9JN71 531 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 H3BN98 237 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 TRIM77I1YAP6 450 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 SLC2A1P11166 492 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 IRF2P14316 349 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 RAD23AP54725 363 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 ZNF404Q494X3 552 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 LINC01590Q5TEZ4 76 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 SPATC1Q76KD6 591 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 KCNJ15Q99712 375 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 ADAT1Q9BUB4 502 aaKnown RBP19.26■□□□□ 0.67
COL9A3-213ENST00000489045 MRI1Q9BV20 369 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 SSBP3Q9BWW4 388 aaPredicted RBP19.26■□□□□ 0.67
COL9A3-213ENST00000489045 MED20Q9H944 212 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 UFSP2Q9NUQ7 469 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 MIOXQ9UGB7 285 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 PPIAL4AQ9Y536 164 aa19.26■□□□□ 0.67
COL9A3-213ENST00000489045 FAM183AA6NL82 134 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 DYNC1I1O14576 645 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 FAM20BO75063 409 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 CPT2P23786 658 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 GRK5P34947 590 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 BLVRAP53004 296 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 ACTG1P63261 375 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 MPPED2Q15777 294 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 TMEM179BQ7Z7N9 219 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 OR11L1Q8NGX0 322 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 Q8TCH9 128 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 CANT1Q8WVQ1 401 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 DVL3Q92997 716 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-213ENST00000489045 ERGIC1Q969X5 290 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 NEIL1Q96FI4 390 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-213ENST00000489045 SLC22A4Q9H015 551 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 NOP16Q9Y3C1 178 aaKnown RBP19.25■□□□□ 0.67
COL9A3-213ENST00000489045 N6AMT1Q9Y5N5 214 aa19.25■□□□□ 0.67
COL9A3-213ENST00000489045 DHRS12A0PJE2 317 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 ARRDC5A6NEK1 342 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 AQP12BA6NM10 295 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 FSTL3O95633 263 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 FPR2P25090 351 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 GNB2P62879 340 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 EIF2B1Q14232 305 aaKnown RBP19.24■□□□□ 0.67
COL9A3-213ENST00000489045 C12orf54Q6X4T0 127 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 AQP12AQ8IXF9 295 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 OR8B3Q8NGG8 313 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 OR6N2Q8NGY6 317 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 FAM216AQ8WUB2 273 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 OTULINQ96BN8 352 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 OR8B2Q96RD0 313 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 ESM1Q9NQ30 184 aa19.24■□□□□ 0.67
COL9A3-213ENST00000489045 GNGT2O14610 69 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 PAX2Q02962 417 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 KLF17Q5JT82 389 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-213ENST00000489045 DPY19L4Q7Z388 723 aa19.23■□□□□ 0.67
COL9A3-213ENST00000489045 ERI1Q8IV48 349 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms