RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ALOX5APP20292 161 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 POLR2IP36954 125 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 SLC15A1P46059 708 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 APOFQ13790 326 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 TAF13Q15543 124 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 CHRFAM7AQ494W8 412 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 C12orf73Q69YU5 71 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 OR2AE1Q8NHA4 323 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 RAB1CQ92928 201 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 SPSB4Q96A44 273 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 MEGF10Q96KG7 1140 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 SIGLEC11Q96RL6 698 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 CIB1Q99828 191 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 PKP2Q99959 881 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 TOR3AQ9H497 397 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 GCM1Q9NP62 436 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 TMEM100Q9NV29 134 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 ZNF319Q9P2F9 582 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 CDC42EP3Q9UKI2 254 aa13.46□□□□□ -0.25
CTDSP1-209ENST00000488627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.265e-8■■■■□ 25.6
CTDSP1-209ENST00000488627 KIAA1324LA8MWY0 1029 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 B4DSR2 109 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 M0R129 80 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 HLA-DPB1P04440 258 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 PMELP40967 661 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 NAA10P41227 235 aaPredicted RBP13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 HCCSP53701 268 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 SLC3A1Q07837 685 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 AADACL4Q5VUY2 407 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 MRPL21Q7Z2W9 205 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 BCDIN3DQ7Z5W3 292 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 SGK3Q96BR1 496 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 TIMD4Q96H15 378 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 OSBPL10Q9BXB5 764 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 ZNF665Q9H7R5 613 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 NPTNQ9Y639 398 aa13.45□□□□□ -0.26
CTDSP1-209ENST00000488627 F5H5P2 479 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 IGHV2-70P01814 119 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 IGHV2-5P01817 119 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 LYNP07948 512 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 CX3CR1P49238 355 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 MMP16P51512 607 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 DVL1P1P54792 670 aaPredicted RBP13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 ZNF121P58317 390 aaPredicted RBP13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 MAB21L1Q13394 359 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 CR1LQ2VPA4 569 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 FAM120AOSQ5T036 256 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 SLC16A9Q7RTY1 509 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 TCEANCQ8N8B7 351 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 THEM6Q8WUY1 208 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 SPRYD4Q8WW59 207 aaPredicted RBP13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 BEX2Q9BXY8 128 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 PPP1R3CQ9UQK1 317 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 N6AMT1Q9Y5N5 214 aa13.44□□□□□ -0.26
CTDSP1-209ENST00000488627 SAC3D1A6NKF1 404 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 TMEM178BH3BS89 294 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 MSMBP08118 114 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 FAM157CP0CG43 387 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 RPS7P62081 194 aaKnown RBP13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 LRRC28Q86X40 367 aaPredicted RBP13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 TMEM163Q8TC26 289 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 GABARAPL3Q9BY60 117 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 YIPF3Q9GZM5 350 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 SHARPINQ9H0F6 387 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 LPAR3Q9UBY5 353 aa13.43□□□□□ -0.26
CTDSP1-209ENST00000488627 IGHV3-64DA0A0J9YX35 117 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 GGT3PA6NGU5 568 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 PRR32B1ATL7 298 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 XRCC2O43543 280 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 APOC1P02654 83 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 H2BFMP0C1H6 154 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 SBK2P0C263 348 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 CA6P23280 308 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 HSD11B1P28845 292 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 GATA4P43694 442 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 SRP9P49458 86 aaKnown RBP13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 RAD23AP54725 363 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 FAM3AP98173 230 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 ZMYND11Q15326 602 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 ZNF181Q2M3W8 571 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 NXNL2Q5VZ03 156 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 ZFP1Q6P2D0 407 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 IL17RELQ6ZVW7 336 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 FAM57BQ71RH2 274 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 MEPCEQ7L2J0 689 aaKnown RBP13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 PEG10Q86TG7 708 aaKnown RBP13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 CELF2-AS1Q8N7Q2 184 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 OR56B2PQ8NGI1 322 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 OR52H1Q8NGJ2 320 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 ZNF420Q8TAQ5 688 aaPredicted RBP13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 TMEM186Q96B77 213 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 IL4I1Q96RQ9 567 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 PRRG3Q9BZD7 231 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 OPA3Q9H6K4 179 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 LPAR2Q9HBW0 351 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 HIF1ANQ9NWT6 349 aa13.42□□□□□ -0.26
CTDSP1-209ENST00000488627 DNAJC27Q9NZQ0 273 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms