RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 POU4F2Q12837 409 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 TMED1Q13445 227 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 TIGD6Q17RP2 521 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 SNAI3Q3KNW1 292 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 GLYATL3Q5SZD4 288 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 DEGS2Q6QHC5 323 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 BHLHE23Q8NDY6 225 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 YIPF5Q969M3 257 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 PGAM5Q96HS1 289 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 SLC29A1Q99808 456 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 OR10A2Q9H208 303 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 BRD7Q9NPI1 651 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF275Q9NSD4 429 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-207ENST00000488591 NOP16Q9Y3C1 178 aaKnown RBP12.8□□□□□ -0.36
CXCL12-207ENST00000488591 GMPPBQ9Y5P6 360 aa12.8□□□□□ -0.36
CXCL12-207ENST00000488591 A0A096LNT2 108 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 SNTNA6NMZ2 147 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 PPIHO43447 177 aaKnown RBP12.79□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF254O75437 659 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 ANPEPP15144 967 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 CFL1P23528 166 aaKnown RBP12.79□□□□□ -0.36
CXCL12-207ENST00000488591 CHN2P52757 468 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF121P58317 390 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF92Q03936 586 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 SLC3A1Q07837 685 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 RCN1Q15293 331 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 TRIP10Q15642 601 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 LRRN1Q6UXK5 716 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 Q6ZR03 302 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 FAM57BQ71RH2 274 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 OR51G2Q8NGK0 314 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 OR2AE1Q8NHA4 323 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 SLC30A2Q9BRI3 323 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 REPIN1Q9BWE0 567 aaKnown RBP12.79□□□□□ -0.36
CXCL12-207ENST00000488591 ADGRL4Q9HBW9 690 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 C8orf4Q9NR00 106 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 IL19Q9UHD0 177 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.79□□□□□ -0.36
CXCL12-207ENST00000488591 KLHDC2Q9Y2U9 406 aa12.79□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-207ENST00000488591 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 CLDN25C9JDP6 229 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF670-ZNF695F2Z2N8 137 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 SBK2P0C263 348 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 SRP9P49458 86 aaKnown RBP12.78□□□□□ -0.36
CXCL12-207ENST00000488591 ROM1Q03395 351 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 TMEM249Q2WGJ8 235 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 MEDAGQ5VYS4 303 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 Q71RC1 249 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-207ENST00000488591 PEG10Q86TG7 708 aaKnown RBP12.78□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF679Q8IYX0 411 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 ZNF555Q8NEP9 628 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 CCL17Q92583 94 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 RAB1CQ92928 201 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 SPSB4Q96A44 273 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 TIMD4Q96H15 378 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 MBOAT4Q96T53 435 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 SLC22A4Q9H015 551 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 RGCCQ9H4X1 137 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 IKZF2Q9UKS7 526 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 LRP12Q9Y561 859 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 CR1P17927 2039 aa12.78□□□□□ -0.36
CXCL12-207ENST00000488591 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 ERICH4A6NGS2 130 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 ACOD1A6NK06 481 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 MPZL2O60487 215 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 RP2O75695 350 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 TACSTD2P09758 323 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 DCTDP32321 178 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 DDOSTP39656 456 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
CXCL12-207ENST00000488591 PRSS12P56730 875 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
CXCL12-207ENST00000488591 CXCR4P61073 352 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 SNRPGP62308 76 aaKnown RBP12.77□□□□□ -0.37
CXCL12-207ENST00000488591 OCLNQ16625 522 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 SLC25A30Q5SVS4 291 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 CYB5R2Q6BCY4 276 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 ZNF322Q6U7Q0 402 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-207ENST00000488591 GALNT4Q8N4A0 578 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 ITLN1Q8WWA0 313 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 HPS1Q92902 700 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 UBE2FQ969M7 185 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 REEP6Q96HR9 211 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 OR8B4Q96RC9 309 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 FAM118AQ9NWS6 357 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 SMPD3Q9NY59 655 aaPredicted RBP12.77□□□□□ -0.37
CXCL12-207ENST00000488591 ZNF391Q9UJN7 358 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 COPS3Q9UNS2 423 aa12.77□□□□□ -0.37
CXCL12-207ENST00000488591 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
CXCL12-207ENST00000488591 TMEM269A0A1B0GVZ9 245 aa12.76□□□□□ -0.37
CXCL12-207ENST00000488591 ANKRD30BLA7E2S9 258 aa12.76□□□□□ -0.37
CXCL12-207ENST00000488591 E9PQ18 207 aa12.76□□□□□ -0.37
CXCL12-207ENST00000488591 PSMD9O00233 223 aa12.76□□□□□ -0.37
CXCL12-207ENST00000488591 CD5LO43866 347 aa12.76□□□□□ -0.37
CXCL12-207ENST00000488591 GMDSO60547 372 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms