RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 RFLNBQ8N5W9 214 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 ZNF611Q8N823 705 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 LILRB1Q8NHL6 650 aaPredicted RBP8.86□□□□□ -0.99
SKA1-204ENST00000488454 SYNPRQ8TBG9 265 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 SLC25A40Q8TBP6 338 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 HAVCR2Q8TDQ0 301 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 C4orf36Q96KX1 117 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 JAM3Q9BX67 310 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 OR2J1Q9GZK6 312 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 PLK3Q9H4B4 646 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 UBAP1Q9NZ09 502 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 MRM2Q9UI43 246 aaKnown RBP8.86□□□□□ -0.99
SKA1-204ENST00000488454 CAB39Q9Y376 341 aaPredicted RBP8.86□□□□□ -0.99
SKA1-204ENST00000488454 SNX5Q9Y5X3 404 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 R4GMQ9 66 aa8.86□□□□□ -0.99
SKA1-204ENST00000488454 B9A039 149 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 LOC110117498-PIK3R3F6TDL0 507 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 H3BSA7 217 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 MYL12BO14950 172 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 XRCC2O43543 280 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 RGS10O43665 173 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 GPRIN2O60269 458 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 CFL1P23528 166 aaKnown RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 CRHBPP24387 322 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 TTKP33981 857 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 ETV1P50549 477 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 KLF3P57682 345 aaPredicted RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 OR12D2P58182 307 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 MRPL28Q13084 256 aaKnown RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 ADIPOQQ15848 244 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 CDONQ4KMG0 1287 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 ZNF684Q5T5D7 378 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 COLCA1Q6ZS62 124 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 RFPL4BQ6ZWI9 263 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 PGAP1Q75T13 922 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 MRPL21Q7Z2W9 205 aaKnown RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 SYS1Q8N2H4 156 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 KLF14Q8TD94 323 aaPredicted RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 TMEM171Q8WVE6 324 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 MRPL24Q96A35 216 aaKnown RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 CMBLQ96DG6 245 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 MARS2Q96GW9 593 aaKnown RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 RHNO1Q9BSD3 238 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 DUSP21Q9H596 190 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 MOB1AQ9H8S9 216 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 PLEKHF2Q9H8W4 249 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 FKBP14Q9NWM8 211 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 PTTG3PQ9NZH4 202 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 FBXO9Q9UK97 447 aaPredicted RBP8.85□□□□□ -0.99
SKA1-204ENST00000488454 FZR1Q9UM11 496 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 PCDHGB5Q9Y5G0 923 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 PKDREJQ9NTG1 2253 aa8.85□□□□□ -0.99
SKA1-204ENST00000488454 A0A1W2PPR1 153 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 A0A1W2PPW3 197 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 GGT3PA6NGU5 568 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 PRR32B1ATL7 298 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 TIMM8AO60220 97 aaPredicted RBP8.84□□□□□ -0.99
SKA1-204ENST00000488454 HTR1AP08908 422 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 LIMS3P0CW19 117 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 LIMS4P0CW20 117 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 PRF1P14222 555 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 RAC2P15153 192 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 ZNF250P15622 560 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 SELEP16581 610 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 C21orf33P30042 268 aaPredicted RBP8.84□□□□□ -0.99
SKA1-204ENST00000488454 PSMB10P40306 273 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 EVX1P49640 407 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 ERVS71-1P61550 626 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 SNRPD2P62316 118 aaKnown RBP8.84□□□□□ -0.99
SKA1-204ENST00000488454 SLC35A2P78381 396 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 MVKQ03426 396 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 GFOD2Q3B7J2 385 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 SNAI3Q3KNW1 292 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 BCL2L15Q5TBC7 163 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 PRR14LQ5THK1 2151 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 MBNL2Q5VZF2 373 aaKnown RBP8.84□□□□□ -0.99
SKA1-204ENST00000488454 COMMD2Q86X83 199 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 OR52N1Q8NH53 320 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 SPRYD4Q8WW59 207 aaPredicted RBP8.84□□□□□ -0.99
SKA1-204ENST00000488454 HAVCR1Q96D42 359 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 SIGLEC11Q96RL6 698 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 SYT3Q9BQG1 590 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 PBOV1Q9GZY1 135 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 RGCCQ9H4X1 137 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 OPA3Q9H6K4 179 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 ISG20L2Q9H9L3 353 aaKnown RBP8.84□□□□□ -0.99
SKA1-204ENST00000488454 CBLN4Q9NTU7 201 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 ACOXLQ9NUZ1 547 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 FAM206AQ9NX38 181 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 BABAM2Q9NXR7 383 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 ERVK-18Q9QC07 812 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 CLEC2DQ9UHP7 191 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 ZNF391Q9UJN7 358 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 OR52A1Q9UKL2 312 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 LAMP3Q9UQV4 416 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 LRCH1Q9Y2L9 728 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 PMF1-BGLAPU3KQ54 211 aa8.84□□□□□ -0.99
SKA1-204ENST00000488454 TMEM129A0AVI4 362 aa8.83□□□□□ -1
SKA1-204ENST00000488454 PLSCR5A0PG75 271 aa8.83□□□□□ -1
SKA1-204ENST00000488454 MRPS14O60783 128 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms