RNA–Protein interactions for RNA: ENST00000488403.5

NOP58-208, Transcript of NOP58 ribonucleoprotein, human

TSL 2

Gene NOP58, Length 871 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP58-208	ENST00000488403	FAM209A	Q5JX71	171 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	KCTD18	Q6PI47	426 aa	Predicted RBP	12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	IL17REL	Q6ZVW7	336 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	PGAP1	Q75T13	922 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	KRT77	Q7Z794	578 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	ZNF786	Q8N393	782 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	ZNF540	Q8NDQ6	660 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	ASB17	Q8WXJ9	295 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	GTF3A	Q92664	365 aa	Known RBP	12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	RDH5	Q92781	318 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	MSI2	Q96DH6	328 aa	Known RBP	12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	ZNF582	Q96NG8	517 aa	Predicted RBP	12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	MBOAT4	Q96T53	435 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	AMELY	Q99218	206 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	EGLN1	Q9GZT9	426 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	SHARPIN	Q9H0F6	387 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	WARS2	Q9UGM6	360 aa	Known RBP	12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	GMPPB	Q9Y5P6	360 aa		12.52	□□□□□ -0.41
NOP58-208	ENST00000488403	ZSCAN5B	A6NJL1	495 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	IGHV1-46	P01743	117 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	HPX	P02790	462 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	ANXA2	P07355	339 aa	Known RBP	12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	SLC2A1	P11166	492 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	HTR1F	P30939	366 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	ATP6V1E1	P36543	226 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	MRPS11	P82912	194 aa	Known RBP	12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	POU4F2	Q12837	409 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	TMEM255A	Q5JRV8	349 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	OR2T2	Q6IF00	324 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	OR5AS1	Q8N127	324 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	GALNT4	Q8N4A0	578 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	TMEM158	Q8WZ71	300 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	MNT	Q99583	582 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	BPESC1	Q9GZL8	116 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	NIPAL2	Q9H841	368 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	MSL2	Q9HCI7	577 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	C8orf4	Q9NR00	106 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	TMEM160	Q9NX00	188 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	HAO2	Q9NYQ3	351 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	DNAJC27	Q9NZQ0	273 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	KLHDC2	Q9Y2U9	406 aa		12.51	□□□□□ -0.41
NOP58-208	ENST00000488403	LRP5L	A4QPB2	252 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	ZNF670-ZNF695	F2Z2N8	137 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	LYNX1	G3V0Z9	82 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	PHYH	O14832	338 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	TBX1	O43435	398 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	XRCC2	O43543	280 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	ADH4	P08319	380 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	LYNX1	P0DP58	116 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	HCCS	P53701	268 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	CDK5R2	Q13319	367 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	TMED1	Q13445	227 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	GK2	Q14410	553 aa	Predicted RBP	12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	LRRC36	Q1X8D7	754 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	SNAI3	Q3KNW1	292 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	FAM166A	Q6J272	317 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	DEGS2	Q6QHC5	323 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	LRRN1	Q6UXK5	716 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	USP51	Q70EK9	711 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	SLC35F2	Q8IXU6	374 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	ZNF555	Q8NEP9	628 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	OR8G5	Q8NG78	346 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	OR2Z1	Q8NG97	314 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	OR13G1	Q8NGZ3	307 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	PGAM5	Q96HS1	289 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	RDH12	Q96NR8	316 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	SOX7	Q9BT81	388 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	OPA3	Q9H6K4	179 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	SAP30L	Q9HAJ7	183 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	BRD7	Q9NPI1	651 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	LPAR3	Q9UBY5	353 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	KCNS2	Q9ULS6	477 aa		12.5	□□□□□ -0.41
NOP58-208	ENST00000488403	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.49	□□□□□ -0.41	1e-8	■■■■■ 31.9
NOP58-208	ENST00000488403	GGT3P	A6NGU5	568 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	SNTN	A6NMZ2	147 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	IQCF6	A8MYZ5	107 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	MPZL2	O60487	215 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	NCR1	O76036	304 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	TGFA	P01135	160 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	SBK2	P0C263	348 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	ACHE	P22303	614 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	ZNF121	P58317	390 aa	Predicted RBP	12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	SNRPG	P62308	76 aa	Known RBP	12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	TNFAIP6	P98066	277 aa	Predicted RBP	12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	SRSF2	Q01130	221 aa	Known RBP	12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	ZNF92	Q03936	586 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	TIGD6	Q17RP2	521 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	GLYATL3	Q5SZD4	288 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	FAM120AOS	Q5T036	256 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	MEDAG	Q5VYS4	303 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	FAM57B	Q71RH2	274 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	PACRGL	Q8N7B6	248 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	BHLHE23	Q8NDY6	225 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	OR52H1	Q8NGJ2	320 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	OR51G2	Q8NGK0	314 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	UBE2F	Q969M7	185 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	ELMOD3	Q96FG2	381 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	MRO	Q9BYG7	248 aa		12.49	□□□□□ -0.41
NOP58-208	ENST00000488403	OR10A2	Q9H208	303 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms