RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RPS6KA6Q9UK32 745 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 FOXJ3Q9UPW0 622 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 KPTNQ9Y664 436 aa12.59□□□□□ -0.39
MCF2L-228ENST00000487354 PTP4A3O75365 173 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 LHBP01229 141 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 KDELR2P33947 212 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 TGFBR2P37173 567 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 CDKN2AP42771 156 aaKnown RBP12.58□□□□□ -0.4
MCF2L-228ENST00000487354 POU4F2Q12837 409 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 TRAM2Q15035 370 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 OR8B8Q15620 311 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 KCNJ8Q15842 424 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 TEX36Q5VZQ5 186 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 SLC18B1Q6NT16 456 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 TSEN54Q7Z6J9 526 aaKnown RBP12.58□□□□□ -0.4
MCF2L-228ENST00000487354 PNKDQ8N490 385 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 Q8N7P7 452 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 GJC3Q8NFK1 279 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 MRAPQ8TCY5 172 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 SLCO4A1Q96BD0 722 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 TPD52L3Q96J77 140 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 ADAT1Q9BUB4 502 aaKnown RBP12.58□□□□□ -0.4
MCF2L-228ENST00000487354 AURKAIP1Q9NWT8 199 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-228ENST00000487354 GMPR2Q9P2T1 348 aaKnown RBP12.58□□□□□ -0.4
MCF2L-228ENST00000487354 SIGLEC7Q9Y286 467 aa12.58□□□□□ -0.4
MCF2L-228ENST00000487354 TENM3Q9P273 2699 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 IGHV3OR15-7A0A075B7D8 119 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 TRAV38-1A0A0B4J264 116 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 A0A1B0GVI7 797 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-228ENST00000487354 SOCS2O14508 198 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 FBP1P09467 338 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 SELENOWP63302 87 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 KLRD1Q13241 179 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 OR8G1Q15617 311 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 C11orf91Q3C1V1 193 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 OXLD1Q5BKU9 147 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 ERICH5Q6P6B1 374 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-228ENST00000487354 RNF113BQ8IZP6 322 aaKnown RBP12.57□□□□□ -0.4
MCF2L-228ENST00000487354 GALNT4Q8N4A0 578 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 C11orf44Q8N8P7 122 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 SLC26A10Q8NG04 563 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 CNTD2Q9H8S5 307 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 SIRT7Q9NRC8 400 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 POLR1DQ9Y2S0 133 aa12.57□□□□□ -0.4
MCF2L-228ENST00000487354 CD300LBA8K4G0 201 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 FAM220BPB1ANY3 271 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 F5H5K5 113 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 NDUFA2O43678 99 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 TXNDC12O95881 172 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 ECDO95905 644 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-228ENST00000487354 IFNA14P01570 189 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 LOXL3P58215 753 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 TRAP1Q12931 704 aaKnown RBP12.56□□□□□ -0.4
MCF2L-228ENST00000487354 CYLC2Q14093 348 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-228ENST00000487354 SNAI3Q3KNW1 292 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 GPR139Q6DWJ6 353 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 CRIP3Q6Q6R5 217 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 ZNF730Q6ZMV8 503 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 PGAP1Q75T13 922 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 WDR86Q86TI4 376 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 ADCK1Q86TW2 530 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 LINC00346Q8IVM7 164 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 C11orf53Q8IXP5 236 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 PLPP7Q8NBV4 271 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 ST8SIA4Q92187 359 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 FAM46AQ96IP4 442 aaKnown RBP12.56□□□□□ -0.4
MCF2L-228ENST00000487354 FNDC11Q9BVV2 318 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 PPA2Q9H2U2 334 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 ADA2Q9NZK5 511 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 FAM96BQ9Y3D0 163 aa12.56□□□□□ -0.4
MCF2L-228ENST00000487354 NPFFO15130 113 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 NDUFB2O95178 105 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 PSKH1P11801 424 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 AMY2BP19961 511 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 GABRA5P31644 462 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 GGT2P36268 569 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 ZNF92Q03936 586 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 Q6ZTK2 550 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 OR6V1Q8N148 313 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 FAM216BQ8N7L0 139 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 OR2AE1Q8NHA4 323 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 SLC7A13Q8TCU3 470 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 NPRL2Q8WTW4 380 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 C17orf50Q8WW18 174 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 SPRYD4Q8WW59 207 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-228ENST00000487354 ITPKCQ96DU7 683 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 ATF6BQ99941 703 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 ONECUT1Q9UBC0 465 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 B9D1Q9UPM9 204 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 IER3IP1Q9Y5U9 82 aa12.55□□□□□ -0.4
MCF2L-228ENST00000487354 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
MCF2L-228ENST00000487354 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms