RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SASH3O75995 380 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 PPP1R3DO95685 299 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 PTBP3O95758 552 aaKnown RBP16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 LCATP04180 440 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 CA6P23280 308 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 CRABP1P29762 137 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 DBPQ10586 325 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 DPY19L2P2Q6ZN68 376 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 GDPGP1Q6ZNW5 385 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 CBLL1Q75N03 491 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 TSEN54Q7Z6J9 526 aaKnown RBP16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 PDZD9Q8IXQ8 264 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 SLC26A10Q8NG04 563 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 HSH2DQ96JZ2 352 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 PITX2Q99697 317 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 ATF6BQ99941 703 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 HOPXQ9BPY8 73 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 ADAT1Q9BUB4 502 aaKnown RBP16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 CMTM6Q9NX76 183 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 B9D1Q9UPM9 204 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 ZNF281Q9Y2X9 895 aa16.05■□□□□ 0.16
SMPDL3A-202ENST00000487215 TRAV38-1A0A0B4J264 116 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 OOEPA6NGQ2 149 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 GSTA4O15217 222 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 NDUFA2O43678 99 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 GYPAP02724 150 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 MDH1P40925 334 aaKnown RBP16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 OMPP47874 163 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 RPS6KA3P51812 740 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 TRAP1Q12931 704 aaKnown RBP16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 C2orf68Q2NKX9 166 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 FKBP9P1Q75LS8 142 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 BTN2A1Q7KYR7 527 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 MRPL21Q7Z2W9 205 aaKnown RBP16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 OR6V1Q8N148 313 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 SLC22A4Q9H015 551 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 DPAGT1Q9H3H5 408 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 C16orf95Q9H693 158 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 PNRC2Q9NPJ4 139 aaKnown RBP16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 TRIM36Q9NQ86 728 aa16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 NOP16Q9Y3C1 178 aaKnown RBP16.04■□□□□ 0.16
SMPDL3A-202ENST00000487215 CD300LBA8K4G0 201 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 CXCR6O00574 342 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 OR10H3O60404 316 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 ECH1Q13011 328 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 FBLN7Q53RD9 439 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 DHRS7BQ6IAN0 325 aaPredicted RBP16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 CYP4Z1Q86W10 505 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 PLPP7Q8NBV4 271 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 LRTOMTQ8WZ04 291 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 RCN3Q96D15 328 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 SRA1Q9HD15 236 aaKnown RBP16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 C1orf123Q9NWV4 160 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 ENPP4Q9Y6X5 453 aa16.03■□□□□ 0.16
SMPDL3A-202ENST00000487215 DVL1O14640 695 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 GMDSO60547 372 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 CCDC22O60826 627 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 H1F0P07305 194 aaKnown RBP16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 LIPEQ05469 1076 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 SF3A3Q12874 501 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 HIST2H2BDQ6DRA6 164 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 CGB2Q6NT52 195 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 ZNF826PQ6ZT77 177 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 VMO1Q7Z5L0 202 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 FAM90A1Q86YD7 464 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 SLC15A3Q8IY34 581 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 GCSAMQ8N6F7 178 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 SEMA6AQ9H2E6 1030 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 CCDC134Q9H6E4 229 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 EFCAB1Q9HAE3 211 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 RPUSD1Q9UJJ7 312 aaKnown RBP16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 FAM96BQ9Y3D0 163 aa16.02■□□□□ 0.16
SMPDL3A-202ENST00000487215 A0A1W2PRQ8 180 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 C5orf63A6NC05 138 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 UNC119BA6NIH7 251 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 TSPAN9O75954 239 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 ECDO95905 644 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 SERPINA1P01009 418 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 CSF1P09603 554 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 ANOS1P23352 680 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 GGT2P36268 569 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 TPTEP56180 551 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 ZNF92Q03936 586 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 POU4F2Q12837 409 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 DGCR6Q14129 220 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 C11orf91Q3C1V1 193 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 SNAI3Q3KNW1 292 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 CDONQ4KMG0 1287 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 HSP90B2PQ58FF3 399 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 FGD3Q5JSP0 725 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 SMARCD3Q6STE5 483 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 FGFRL1Q8N441 504 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 OR2AJ1Q8NGZ0 328 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 ST8SIA4Q92187 359 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 ERMAPQ96PL5 475 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 NMNAT3Q96T66 252 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 CNTD2Q9H8S5 307 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 ZNRD1Q9P1U0 126 aa16.01■□□□□ 0.15
SMPDL3A-202ENST00000487215 CYB5R1Q9UHQ9 305 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms