RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CARTPTQ16568 116 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 LRRN1Q6UXK5 716 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 BCDIN3DQ7Z5W3 292 aaKnown RBP12.49□□□□□ -0.41
LIMS3-205ENST00000487150 KLBQ86Z14 1044 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 DHRSXQ8N5I4 330 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 OR8G5Q8NG78 346 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 C10orf105Q8TEF2 133 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 SPSB4Q96A44 273 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 PGAM5Q96HS1 289 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 OR8B4Q96RC9 309 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
LIMS3-205ENST00000487150 AKAP9Q99996 3911 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 IRGMA1A4Y4 181 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 ZSCAN5BA6NJL1 495 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 H0YAE9 185 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 H7C1Q1 480 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 SPRY3O43610 288 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 SULT1C4O75897 302 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 IGHV1-46P01743 117 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 GIFP27352 417 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 TNFAIP6P98066 277 aaPredicted RBP12.48□□□□□ -0.41
LIMS3-205ENST00000487150 CDK5R2Q13319 367 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 TNK1Q13470 666 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 HLXQ14774 488 aaPredicted RBP12.48□□□□□ -0.41
LIMS3-205ENST00000487150 SNAI3Q3KNW1 292 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 ALKBH6Q3KRA9 238 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 USP51Q70EK9 711 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 FAM57BQ71RH2 274 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 BIVMQ86UB2 503 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 ENTHD1Q8IYW4 607 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 OR10H4Q8NGA5 316 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 RHOXF1Q8NHV9 184 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 CYGBQ8WWM9 190 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 AMELYQ99218 206 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
LIMS3-205ENST00000487150 POFUT1Q9H488 388 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 ABCB9Q9NP78 766 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 MRPL15Q9P015 296 aaKnown RBP12.48□□□□□ -0.41
LIMS3-205ENST00000487150 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
LIMS3-205ENST00000487150 RPL36Q9Y3U8 105 aaKnown RBP12.48□□□□□ -0.41
LIMS3-205ENST00000487150 IGHV1-69-2A0A0G2JMI3 117 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.47□□□□□ -0.41
LIMS3-205ENST00000487150 TMEM269A0A1B0GVZ9 245 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 TRIM64A6NGJ6 449 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 TRIM64BA6NI03 449 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 H0YJX3 145 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 ENTPD6O75354 484 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 FADS2O95864 444 aaKnown RBP12.47□□□□□ -0.41
LIMS3-205ENST00000487150 HEXAP06865 529 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 INHBBP09529 407 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 SLC2A1P11166 492 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 SRP9P49458 86 aaKnown RBP12.47□□□□□ -0.41
LIMS3-205ENST00000487150 MMP16P51512 607 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 TMEM33P57088 247 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 ACTA2P62736 377 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 ACTG2P63267 376 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 CCL8P80075 99 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 IL5RAQ01344 420 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 HFEQ30201 348 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 OR2T2Q6IF00 324 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 PLEKHG7Q6ZR37 379 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF771Q7L3S4 317 aaPredicted RBP12.47□□□□□ -0.41
LIMS3-205ENST00000487150 EGFL6Q8IUX8 553 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 ZCCHC24Q8N2G6 241 aaKnown RBP12.47□□□□□ -0.41
LIMS3-205ENST00000487150 SPERTQ8NA61 448 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 REEP6Q96HR9 211 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 SLC30A2Q9BRI3 323 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 REG4Q9BYZ8 158 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 MSL2Q9HCI7 577 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 INPP5EQ9NRR6 644 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 IL19Q9UHD0 177 aa12.47□□□□□ -0.41
LIMS3-205ENST00000487150 IGHV4-30-2A0A087WSY4 118 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 A0A0U1RQV5 110 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 ANKRD30BLA7E2S9 258 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 CLDN25C9JDP6 229 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 ATP6V1B1P15313 513 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
LIMS3-205ENST00000487150 CAPGP40121 348 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 NR4A2P43354 598 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 MAGEB1P43366 347 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF92Q03936 586 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 LOXL1Q08397 574 aaPredicted RBP12.46□□□□□ -0.41
LIMS3-205ENST00000487150 RAB40BQ12829 278 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 MED21Q13503 144 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 ZNF691Q5VV52 312 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 PRSS45Q7RTY3 260 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.41
LIMS3-205ENST00000487150 PEG10Q86TG7 708 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms