RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PGGHGQ32M88 737 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 TRMT12Q53H54 448 aaKnown RBP5.91□□□□□ -1.46
HDAC3-209ENST00000486618 PDSS1Q5T2R2 415 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF544Q6NX49 715 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 CBLN3Q6UW01 205 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 SSX8Q7RTT4 187 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 HDDC2Q7Z4H3 204 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ISCA2Q86U28 154 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 DTX2Q86UW9 622 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 TGIF2LXQ8IUE1 241 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 CROCCP3Q8IVE0 287 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ADGRG5Q8IZF4 528 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 SLC35F6Q8N357 371 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF561Q8N587 486 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 LINC00482Q8N8I6 264 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 CDYL2Q8N8U2 506 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 SYT14Q8NB59 555 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 OR52B6Q8NGF0 335 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 OR5T2Q8NGG2 359 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 WDR20Q8TBZ3 569 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF675Q8TD23 568 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 RNF138Q8WVD3 245 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 RAB40AQ8WXH6 277 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ACOT11Q8WXI4 607 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-209ENST00000486618 NEUROG1Q92886 237 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 YIPF5Q969M3 257 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 SLC25A28Q96A46 364 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 EME1Q96AY2 570 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF385AQ96PM9 386 aaKnown RBP5.91□□□□□ -1.46
HDAC3-209ENST00000486618 TSSK3Q96PN8 268 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 ATOH8Q96SQ7 321 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 GPR22Q99680 433 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 SYT3Q9BQG1 590 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 FAIM2Q9BWQ8 316 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 VCXQ9H320 206 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 FN3KQ9H479 309 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 C20orf141Q9NUB4 165 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 GIN1Q9NXP7 522 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 MED11Q9P086 117 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 XPR1Q9UBH6 696 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 OPN4Q9UHM6 478 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 CES1P1Q9UKY3 287 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 KCNS2Q9ULS6 477 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 GPR132Q9UNW8 380 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 B3GALT5Q9Y2C3 310 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 KPTNQ9Y664 436 aa5.91□□□□□ -1.46
HDAC3-209ENST00000486618 A0A096LNT2 108 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 AGAP5A6NIR3 686 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 METTL15A6NJ78 407 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CGB1A6NKQ9 187 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 PPIAL4DF5H284 164 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 P2RY10O00398 339 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 SURF4O15260 269 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 TCAPO15273 167 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CFLARO15519 480 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CHP2O43745 196 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 FADS1O60427 444 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 GMDSO60547 372 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 FCGR3BO75015 233 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 BRI3O95415 125 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CLDN9O95484 217 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 ADAP00813 363 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CD8AP01732 235 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 LCKP06239 509 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CSF3P09919 207 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CT45A8P0DMV1 189 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CT45A9P0DMV2 189 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 COX4I1P13073 169 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 USF1P22415 310 aaPredicted RBP5.9□□□□□ -1.46
HDAC3-209ENST00000486618 IVDP26440 423 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CRHR1P34998 444 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 SLC6A8P48029 635 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 NPBWR1P48145 328 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 PRKXP51817 358 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 BSPH1Q075Z2 132 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF844Q08AG5 666 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 GTF2H2Q13888 395 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 ARL6IP1Q15041 203 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 P2RY6Q15077 328 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 RAB35Q15286 201 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 SLC9A3R2Q15599 337 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 TAB1Q15750 504 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 CT45A2Q5DJT8 189 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 C6orf10Q5SRN2 563 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 PXDC1Q5TGL8 231 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MROH9Q5TGP6 573 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 OR2G6Q5TZ20 316 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 FRG2Q64ET8 278 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 FAM166AQ6J272 317 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 GTF2H2CQ6P1K8 395 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 C12orf54Q6X4T0 127 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 C17orf107Q6ZR85 190 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MRPL21Q7Z2W9 205 aaKnown RBP5.9□□□□□ -1.46
HDAC3-209ENST00000486618 GLB1L2Q8IW92 636 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 BOD1L2Q8IYS8 172 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 MREGQ8N565 214 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 STXBP6Q8NFX7 210 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 KBTBD8Q8NFY9 601 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 OR6X1Q8NH79 312 aa5.9□□□□□ -1.46
HDAC3-209ENST00000486618 OR10D3Q8NH80 312 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms