RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SETD9Q8NE22 299 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 CNIH3Q8TBE1 160 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 APH1BQ8WW43 257 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 FAM168AQ92567 244 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 Q96MT0 163 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 OR10A2Q9H208 303 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 SP140LQ9H930 580 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 AMBNQ9NP70 447 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 CYSLTR2Q9NS75 346 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 CGGBP1Q9UFW8 167 aaPredicted RBP10.1□□□□□ -0.79
HPS4-214ENST00000485842 GTF2A1LQ9UNN4 478 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 AKAP9Q99996 3911 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 ITPR3Q14573 2671 aa10.1□□□□□ -0.79
HPS4-214ENST00000485842 A0A1W2PQL4 384 aaPredicted RBP10.09□□□□□ -0.79
HPS4-214ENST00000485842 GGT3PA6NGU5 568 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 ATP6V1G2O95670 118 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 IGHV1-46P01743 117 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 HPXP02790 462 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 KRT8P05787 483 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 CSF3P09919 207 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 OR2T7P0C7T2 308 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 DBTP11182 482 aaKnown RBP10.09□□□□□ -0.79
HPS4-214ENST00000485842 LIPAP38571 399 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 PDLIM4P50479 330 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 AQP4P55087 323 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 ROM1Q03395 351 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 MFGE8Q08431 387 aaPredicted RBP10.09□□□□□ -0.79
HPS4-214ENST00000485842 TNK1Q13470 666 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 SMN1Q16637 294 aaKnown RBP10.09□□□□□ -0.79
HPS4-214ENST00000485842 ZNF829Q3KNS6 432 aaPredicted RBP10.09□□□□□ -0.79
HPS4-214ENST00000485842 PCGF3Q3KNV8 242 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 DEGS2Q6QHC5 323 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 Q6ZR03 302 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 YIPF7Q8N8F6 280 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 OR8G5Q8NG78 346 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 OR52H1Q8NGJ2 320 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 OR2T27Q8NH04 317 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 SPRYD4Q8WW59 207 aaPredicted RBP10.09□□□□□ -0.79
HPS4-214ENST00000485842 LGALS12Q96DT0 336 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 REEP6Q96HR9 211 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 RHNO1Q9BSD3 238 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 DECR2Q9NUI1 292 aa10.09□□□□□ -0.79
HPS4-214ENST00000485842 MRM2Q9UI43 246 aaKnown RBP10.09□□□□□ -0.79
HPS4-214ENST00000485842 IGHV4-30-2A0A087WSY4 118 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 TMEM269A0A1B0GVZ9 245 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 DAPL1A0PJW8 107 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 IQCF6A8MYZ5 107 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 H0YAE9 185 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 H7C1Q1 480 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 SMAD7O15105 426 aaKnown RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 CDC14BO60729 498 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 LILRA1O75019 489 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 ZNF254O75437 659 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 WBP4O75554 376 aaKnown RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 RPP14O95059 124 aaKnown RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 GNAO1P09471 354 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 CD99P14209 185 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 ACTC1P68032 377 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 ACTA1P68133 377 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 TNFAIP6P98066 277 aaPredicted RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 ZNF85Q03923 595 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 EGR3Q06889 387 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 IL18R1Q13478 541 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 PRSS45Q7RTY3 260 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 C8orf59Q8N0T1 100 aaPredicted RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 OR2Z1Q8NG97 314 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 OR10AD1Q8NGE0 317 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 OR8B12Q8NGG6 310 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 OR56B2PQ8NGI1 322 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 PIMREGQ9BSJ6 248 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 REPIN1Q9BWE0 567 aaKnown RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 VCX3BQ9H321 246 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 OPA3Q9H6K4 179 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 SAP30LQ9HAJ7 183 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 MYOZ1Q9NP98 299 aaPredicted RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 FAM206AQ9NX38 181 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 ZNF319Q9P2F9 582 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 ZDHHC8Q9ULC8 765 aa10.08□□□□□ -0.8
HPS4-214ENST00000485842 RRP15Q9Y3B9 282 aaKnown RBP10.08□□□□□ -0.8
HPS4-214ENST00000485842 MAP1AP78559 2803 aaPredicted RBP10.07□□□□□ -0.8
HPS4-214ENST00000485842 METTL15A6NJ78 407 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 CD300LBA8K4G0 201 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 LOC110117498-PIK3R3F6TDL0 507 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 H0YL77 283 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 ADH4P08319 380 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 TNFSF4P23510 183 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 DSCR9P59020 149 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 CDK5R2Q13319 367 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 RIPK1Q13546 671 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 TP53I3Q53FA7 332 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 FAM209AQ5JX71 171 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 C6orf52Q5T4I8 152 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 BCL2L15Q5TBC7 163 aa10.07□□□□□ -0.8
HPS4-214ENST00000485842 IZUMO2Q6UXV1 221 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms