RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 SNAPC1Q16533 368 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 KLHL12Q53G59 568 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 SLC35D3Q5M8T2 416 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 GLYATL3Q5SZD4 288 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 KDM4DQ6B0I6 523 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 PRSS45Q7RTY3 260 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 PEG10Q86TG7 708 aaKnown RBP12.63□□□□□ -0.39
YIF1A-208ENST00000485820 LRRC28Q86X40 367 aaPredicted RBP12.63□□□□□ -0.39
YIF1A-208ENST00000485820 OR10AD1Q8NGE0 317 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 OR2AE1Q8NHA4 323 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 OTOSQ8NHW6 89 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 TMEM186Q96B77 213 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 MDFIQ99750 246 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 TOR3AQ9H497 397 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 LPAR2Q9HBW0 351 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 KIF17Q9P2E2 1029 aa12.63□□□□□ -0.39
YIF1A-208ENST00000485820 CD300LBA8K4G0 201 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 F5H5P2 479 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 SELENOFO60613 162 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 IFNA2P01563 188 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 SBK2P0C263 348 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 EPHA2P29317 976 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 PMELP40967 661 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 OPRL1P41146 370 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 SRP9P49458 86 aaKnown RBP12.62□□□□□ -0.39
YIF1A-208ENST00000485820 MAB21L1Q13394 359 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 CXXC5Q7LFL8 322 aaKnown RBP12.62□□□□□ -0.39
YIF1A-208ENST00000485820 MRPL21Q7Z2W9 205 aaKnown RBP12.62□□□□□ -0.39
YIF1A-208ENST00000485820 GLCCI1Q86VQ1 547 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 ZDHHC13Q8IUH4 622 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 OR51F2Q8NH61 342 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 ZNF420Q8TAQ5 688 aaPredicted RBP12.62□□□□□ -0.39
YIF1A-208ENST00000485820 SPSB4Q96A44 273 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 SGK3Q96BR1 496 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 RAB39BQ96DA2 213 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 PLEKHA8Q96JA3 519 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 TEAD3Q99594 435 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 TEX12Q9BXU0 123 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 GABARAPL1Q9H0R8 117 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 N6AMT1Q9Y5N5 214 aa12.62□□□□□ -0.39
YIF1A-208ENST00000485820 DOCK11Q5JSL3 2073 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 ZAR1LA6NP61 321 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 PLPP2O43688 288 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 PRKYO43930 277 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 CIB2O75838 187 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 FCGR1AP12314 374 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 SRD5A1P18405 259 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 THBS2P35442 1172 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 CX3CR1P49238 355 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 HCCSP53701 268 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 APOFQ13790 326 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 ZNF454Q8N9F8 522 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 SPRYD4Q8WW59 207 aaPredicted RBP12.61□□□□□ -0.39
YIF1A-208ENST00000485820 CENPNQ96H22 339 aaPredicted RBP12.61□□□□□ -0.39
YIF1A-208ENST00000485820 GAL3ST1Q99999 423 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 SEMA6AQ9H2E6 1030 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 ZNF319Q9P2F9 582 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 KLHDC2Q9Y2U9 406 aa12.61□□□□□ -0.39
YIF1A-208ENST00000485820 TRAV20A0A0B4J274 112 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 IGHV3-64DA0A0J9YX35 117 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 ISPDA4D126 451 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 CCDC182A6NF36 153 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 GGT3PA6NGU5 568 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 IFNL4K9M1U5 179 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 XRCC2O43543 280 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 APOC1P02654 83 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 LYNP07948 512 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 ALOX5APP20292 161 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 HNF1AP20823 631 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 CA6P23280 308 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 HSD11B1P28845 292 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 POLR2IP36954 125 aaKnown RBP12.6□□□□□ -0.39
YIF1A-208ENST00000485820 CD200P41217 278 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 GATA4P43694 442 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 MMP16P51512 607 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 ZNF121P58317 390 aaPredicted RBP12.6□□□□□ -0.39
YIF1A-208ENST00000485820 ACTR3P61158 418 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 ZMYND11Q15326 602 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 ZNF181Q2M3W8 571 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 TMEM155Q4W5P6 130 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 SLX4IPQ5VYV7 408 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 C12orf73Q69YU5 71 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 CCDC121Q6ZUS5 278 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 CELF2-AS1Q8N7Q2 184 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 THEM6Q8WUY1 208 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 SLC22A4Q9H015 551 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 G6PC2Q9NQR9 355 aa12.6□□□□□ -0.39
YIF1A-208ENST00000485820 FBN1P35555 2871 aaKnown RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 ATRQ13535 2644 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 MXRA5Q9NR99 2828 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 GMDSO60547 372 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 CYB5R3P00387 301 aaPredicted RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 ANXA2P07355 339 aaKnown RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 H2BFMP0C1H6 154 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 PCMT1P22061 227 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 RAD23AP54725 363 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms