RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 PSMC3IPQ9P2W1 217 aaPredicted RBP1.08□□□□□ -2.24
SFPQ-209ENST00000485454 CSDC2Q9Y534 153 aaKnown RBP1.08□□□□□ -2.24
SFPQ-209ENST00000485454 FHOD3Q2V2M9 1422 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 NCBP2LA6PVI3 153 aaKnown RBP1.07□□□□□ -2.24
SFPQ-209ENST00000485454 SYCE1LA8MT33 242 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 H7C1H1 209 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 DNALI1O14645 258 aaPredicted RBP1.07□□□□□ -2.24
SFPQ-209ENST00000485454 SERPINE2P07093 398 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 TNNI1P19237 187 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 IL32P24001 234 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 HLA-DMAP28067 261 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 FUSP35637 526 aaKnown RBP eCLIP1.07□□□□□ -2.24
SFPQ-209ENST00000485454 TAS2R46P59540 309 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 BST1Q10588 318 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 CHIT1Q13231 466 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 PPM1LQ5SGD2 360 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 MBOAT2Q6ZWT7 520 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 ZCCHC7Q8N3Z6 543 aaKnown RBP1.07□□□□□ -2.24
SFPQ-209ENST00000485454 LRRC75AQ8NAA5 344 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 LY6G5BQ8NDX9 201 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 OR6Q1Q8NGQ2 317 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 KIFAP3Q92845 792 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 GHSRQ92847 366 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 TRIM45Q9H8W5 580 aaPredicted RBP1.07□□□□□ -2.24
SFPQ-209ENST00000485454 ASF1BQ9NVP2 202 aa1.07□□□□□ -2.24
SFPQ-209ENST00000485454 MCTS1Q9ULC4 181 aaKnown RBP1.07□□□□□ -2.24
SFPQ-209ENST00000485454 RPRD2Q5VT52 1461 aaKnown RBP1.06□□□□□ -2.24
SFPQ-209ENST00000485454 IGKV1-27A0A075B6S5 117 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 BICDL2A1A5D9 508 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 GOLGA6L4A6NEF3 574 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 K7EMT4 169 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 CLDN11O75508 207 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 PALMO75781 387 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 SCO1O75880 301 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 FLOT1O75955 427 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 AQP8O94778 261 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 ANXA5P08758 320 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 HSPD1P10809 573 aaKnown RBP1.06□□□□□ -2.24
SFPQ-209ENST00000485454 TNNT2P45379 298 aaPredicted RBP1.06□□□□□ -2.24
SFPQ-209ENST00000485454 TAS2R43P59537 309 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 SEMG2Q02383 582 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 ART3Q13508 389 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 PRAMEF5Q5TYX0 476 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 PRAMEF6Q5VXH4 476 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 AMMECR1LQ6DCA0 310 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 RNASEKQ6P5S7 137 aaKnown RBP1.06□□□□□ -2.24
SFPQ-209ENST00000485454 TMEM107Q6UX40 140 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 RTL4Q6ZR62 310 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 PPP1R42Q7Z4L9 355 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 NBPF5PQ86XG9 351 aaPredicted RBP1.06□□□□□ -2.24
SFPQ-209ENST00000485454 OR51E1Q8TCB6 317 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 RNF145Q96MT1 663 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 C18orf15Q96N68 181 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 ZBTB18Q99592 522 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 SLIRPQ9GZT3 109 aaKnown RBP1.06□□□□□ -2.24
SFPQ-209ENST00000485454 DUSP21Q9H596 190 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 HYPKQ9NX55 129 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 SLC2A8Q9NY64 477 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 TAS2R5Q9NYW4 299 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 HMGXB4Q9UGU5 601 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 RAB23Q9ULC3 237 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 FARSAQ9Y285 508 aaKnown RBP1.06□□□□□ -2.24
SFPQ-209ENST00000485454 LRRC42Q9Y546 428 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 VWA8A3KMH1 1905 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 PCDH11XQ9BZA7 1347 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 CACNA1GO43497 2377 aa1.06□□□□□ -2.24
SFPQ-209ENST00000485454 IGHV3OR16-9A0A0B4J2B5 98 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 XKRY2A2RUG3 117 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 MMP7P09237 267 aaPredicted RBP1.05□□□□□ -2.24
SFPQ-209ENST00000485454 ZNF24P17028 368 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 NELFEP18615 380 aaKnown RBP1.05□□□□□ -2.24
SFPQ-209ENST00000485454 PRKACBP22694 351 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 SLC1A1P43005 524 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 HNMTP50135 292 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 ACLYP53396 1101 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 EIF3EP60228 445 aaKnown RBP1.05□□□□□ -2.24
SFPQ-209ENST00000485454 TAF7Q15545 349 aaPredicted RBP1.05□□□□□ -2.24
SFPQ-209ENST00000485454 PSMD5Q16401 504 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 CPTPQ5TA50 214 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 IQCKQ8N0W5 287 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 UBE2J2Q8N2K1 259 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 LINC00469Q8N7U9 141 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 C19orf18Q8NEA5 215 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 OR52N1Q8NH53 320 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 NUBPLQ8TB37 319 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 HAUS1Q96CS2 278 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 NRBF2Q96F24 287 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 TOLLIPQ9H0E2 274 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 ZNF302Q9NR11 478 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 NLE1Q9NVX2 485 aaPredicted RBP1.05□□□□□ -2.24
SFPQ-209ENST00000485454 CCDC59Q9P031 241 aaKnown RBP1.05□□□□□ -2.24
SFPQ-209ENST00000485454 BLOC1S6Q9UL45 172 aa1.05□□□□□ -2.24
SFPQ-209ENST00000485454 PRRC2BQ5JSZ5 2229 aaKnown RBP1.05□□□□□ -2.24
SFPQ-209ENST00000485454 TENM1Q9UKZ4 2725 aa1.04□□□□□ -2.24
SFPQ-209ENST00000485454 IGLV10-54A0A075B6I4 117 aa1.04□□□□□ -2.24
SFPQ-209ENST00000485454 SMCO2A6NFE2 343 aa1.04□□□□□ -2.24
SFPQ-209ENST00000485454 CENPBD1B2RD01 187 aa1.04□□□□□ -2.24
SFPQ-209ENST00000485454 CLDN34H7C241 214 aa1.04□□□□□ -2.24
SFPQ-209ENST00000485454 SCAMP2O15127 329 aaKnown RBP1.04□□□□□ -2.24
SFPQ-209ENST00000485454 NMT2O60551 498 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms