RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 HLA-DQA2P01906 255 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 OR8G1Q15617 311 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 FAM201AQ5SY85 155 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 DRAM2Q6UX65 266 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 LYPD2Q6UXB3 125 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 MRPL21Q7Z2W9 205 aaKnown RBP9.55□□□□□ -0.88
SCFD1-206ENST00000484733 SPERTQ8NA61 448 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 OR10S1Q8NGN2 331 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 OR2T4Q8NH00 348 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF799Q96GE5 643 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 TRIM15Q9C019 465 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 SLITRK2Q9H156 845 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 FN3KQ9H479 309 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 OPA3Q9H6K4 179 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 UNKLQ9H9P5 680 aaKnown RBP9.55□□□□□ -0.88
SCFD1-206ENST00000484733 IL20Q9NYY1 176 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 MMP24Q9Y5R2 645 aa9.55□□□□□ -0.88
SCFD1-206ENST00000484733 LGALS8O00214 317 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 ATP8B1O43520 1251 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 ENSAO43768 121 aaKnown RBP9.54□□□□□ -0.88
SCFD1-206ENST00000484733 PCK2Q16822 640 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 C11orf91Q3C1V1 193 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 TEX30Q5JUR7 227 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF362Q5T0B9 420 aaPredicted RBP9.54□□□□□ -0.88
SCFD1-206ENST00000484733 CD276Q5ZPR3 534 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 ZDHHC21Q8IVQ6 265 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 OR52L1Q8NGH7 329 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 DUX5Q96PT3 197 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 NOX4Q9NPH5 578 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 MRPL15Q9P015 296 aaKnown RBP9.54□□□□□ -0.88
SCFD1-206ENST00000484733 V9GYQ6 96 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 P2RY10O00398 339 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 NDUFA2O43678 99 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 LIPFP07098 398 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 PRAMEF6Q5VXH4 476 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 C16orf87Q6PH81 154 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 RASSF6Q6ZTQ3 369 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 OR4C15Q8NGM1 316 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 CDRT15Q96T59 188 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 NDE1Q9NXR1 346 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 TAGLN3Q9UI15 199 aa9.54□□□□□ -0.88
SCFD1-206ENST00000484733 TRAV40A0A0B4J280 105 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 IGHV3-64DA0A0J9YX35 117 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 CA6P23280 308 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 PYCR1P32322 319 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 FGF12P61328 243 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF92Q03936 586 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 MZT1Q08AG7 82 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 MPPED2Q15777 294 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 SNAI3Q3KNW1 292 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 SLC35F1Q5T1Q4 408 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 ZNF770Q6IQ21 691 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-206ENST00000484733 KCNJ15Q99712 375 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 EGLN3Q9H6Z9 239 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 ERVK-18Q9QC07 812 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 BAIAP2Q9UQB8 552 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 LYVE1Q9Y5Y7 322 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 SOX21Q9Y651 276 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-206ENST00000484733 DOCK11Q5JSL3 2073 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 IGHV3OR16-10A0A075B7F0 116 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 A0A1B0GUS0 222 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 C22orf46C9J442 243 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 SLC25A1P53007 311 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 PRSS12P56730 875 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 DBPQ10586 325 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-206ENST00000484733 GLYATL3Q5SZD4 288 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 C16orf89Q6UX73 402 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 LNX2Q8N448 690 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 SLC37A3Q8NCC5 494 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 PROKR2Q8NFJ6 384 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 ZNRF4Q8WWF5 429 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 SPSB4Q96A44 273 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 ADAT1Q9BUB4 502 aaKnown RBP9.53□□□□□ -0.88
SCFD1-206ENST00000484733 NMNAT2Q9BZQ4 307 aa9.53□□□□□ -0.88
SCFD1-206ENST00000484733 TRAV38-1A0A0B4J264 116 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 GGT3PA6NGU5 568 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 SRRM5B3KS81 715 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 ZNF879B4DU55 563 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 TNFRSF11BO00300 401 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 MSX2P35548 267 aaPredicted RBP9.52□□□□□ -0.89
SCFD1-206ENST00000484733 DDOSTP39656 456 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 MAGEA2P43356 314 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 DEFB112Q30KQ8 113 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 GPR157Q5UAW9 335 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 Q6YL49 198 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 UFSP2Q9NUQ7 469 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 CTSZQ9UBR2 303 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 COMMD3-BMI1R4GMX3 469 aa9.52□□□□□ -0.89
SCFD1-206ENST00000484733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-206ENST00000484733 TVP23AA6NH52 213 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 XRCC2O43543 280 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 LHBP01229 141 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 PSKH1P11801 424 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 MMP9P14780 707 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 FMO3P31513 532 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 CFHR2P36980 270 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 ENTPD1P49961 510 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 BLVRAP53004 296 aa9.51□□□□□ -0.89
SCFD1-206ENST00000484733 DCXRQ7Z4W1 244 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms