RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 LRP5LA4QPB2 252 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 SLC22A31A6NKX4 558 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 CLDN25C9JDP6 229 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 MLNRO43193 412 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 PPIHO43447 177 aaKnown RBP15.24■□□□□ 0.03
HDAC6-225ENST00000483506 XRCC2O43543 280 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 TNFRSF1AP19438 455 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 HSD11B1P28845 292 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 SLC3A1Q07837 685 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 DEGS2Q6QHC5 323 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 MRPL21Q7Z2W9 205 aaKnown RBP15.24■□□□□ 0.03
HDAC6-225ENST00000483506 GID4Q8IVV7 300 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 PQLC1Q8N2U9 271 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 THEM6Q8WUY1 208 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 CNN2Q99439 309 aaKnown RBP15.24■□□□□ 0.03
HDAC6-225ENST00000483506 NIPAL2Q9H841 368 aa15.24■□□□□ 0.03
HDAC6-225ENST00000483506 CD300LBA8K4G0 201 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 INAFM1C9JVW0 142 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 H2BFMP0C1H6 154 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 SLC2A1P11166 492 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 IL2RGP31785 369 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 RAD23AP54725 363 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 ZNF121P58317 390 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-225ENST00000483506 ROM1Q03395 351 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 BCDIN3DQ7Z5W3 292 aaKnown RBP15.23■□□□□ 0.03
HDAC6-225ENST00000483506 CBR4Q8N4T8 237 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 OR52H1Q8NGJ2 320 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 OR8J1Q8NGP2 316 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 OR2AE1Q8NHA4 323 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 MSI2Q96DH6 328 aaKnown RBP15.23■□□□□ 0.03
HDAC6-225ENST00000483506 POM121Q96HA1 1249 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 HRASLS5Q96KN8 279 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 OR2V2Q96R30 315 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 IL4I1Q96RQ9 567 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 MNTQ99583 582 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 SOX7Q9BT81 388 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 C9orf16Q9BUW7 83 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 TMEM100Q9NV29 134 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 TMEM160Q9NX00 188 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 LAMP5Q9UJQ1 280 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 ORC6Q9Y5N6 252 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 TMEM14AQ9Y6G1 99 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 DYSFO75923 2080 aa15.23■□□□□ 0.03
HDAC6-225ENST00000483506 A8MV72 311 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-225ENST00000483506 ZNF16P17020 682 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-225ENST00000483506 PSMA6P60900 246 aaKnown RBP15.22■□□□□ 0.03
HDAC6-225ENST00000483506 CELF2-AS1Q8N7Q2 184 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 BHLHE23Q8NDY6 225 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 OR10AD1Q8NGE0 317 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 CLDND2Q8NHS1 167 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 ITLN1Q8WWA0 313 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 TRUB1Q8WWH5 349 aaKnown RBP15.22■□□□□ 0.03
HDAC6-225ENST00000483506 ASB17Q8WXJ9 295 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 CCL17Q92583 94 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 MEGF10Q96KG7 1140 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 SLC22A4Q9H015 551 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 ADGRL4Q9HBW9 690 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 YAE1D1Q9NRH1 226 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 MRPL15Q9P015 296 aaKnown RBP15.22■□□□□ 0.03
HDAC6-225ENST00000483506 H2AFY2Q9P0M6 372 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-225ENST00000483506 WARS2Q9UGM6 360 aaKnown RBP15.22■□□□□ 0.03
HDAC6-225ENST00000483506 WIPI2Q9Y4P8 454 aa15.22■□□□□ 0.03
HDAC6-225ENST00000483506 H0YL77 283 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 IFNL4K9M1U5 179 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 WNT9BO14905 357 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 ANXA2P07355 339 aaKnown RBP15.21■□□□□ 0.03
HDAC6-225ENST00000483506 MRPL3P09001 348 aaKnown RBP15.21■□□□□ 0.03
HDAC6-225ENST00000483506 CFL1P23528 166 aaKnown RBP15.21■□□□□ 0.03
HDAC6-225ENST00000483506 DCTDP32321 178 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 GATA4P43694 442 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 HCCSP53701 268 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 CDH15P55291 814 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 PRSS12P56730 875 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 CDC42P60953 191 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 TMED1Q13445 227 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 KCTD18Q6PI47 426 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-225ENST00000483506 LRRN1Q6UXK5 716 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-225ENST00000483506 SPRYD4Q8WW59 207 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-225ENST00000483506 RAB1CQ92928 201 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 SGK3Q96BR1 496 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 TIMD4Q96H15 378 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 OR10A2Q9H208 303 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 RGCCQ9H4X1 137 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 GCM1Q9NP62 436 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 TMEM106BQ9NUM4 274 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 ZNF319Q9P2F9 582 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 COPS3Q9UNS2 423 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 NOP16Q9Y3C1 178 aaKnown RBP15.21■□□□□ 0.03
HDAC6-225ENST00000483506 LRP12Q9Y561 859 aa15.21■□□□□ 0.03
HDAC6-225ENST00000483506 hCG_38984A0A1B0GV85 526 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 ACOD1A6NK06 481 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 PRR32B1ATL7 298 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 ZNF254O75437 659 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 PTBP3O95758 552 aaKnown RBP15.2■□□□□ 0.02
HDAC6-225ENST00000483506 HTR1FP30939 366 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 DDOSTP39656 456 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 CD200P41217 278 aa15.2■□□□□ 0.02
HDAC6-225ENST00000483506 SRP9P49458 86 aaKnown RBP15.2■□□□□ 0.02
HDAC6-225ENST00000483506 LMO4P61968 165 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms